| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0390 |
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| Symbol | |
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| ID | 6160573 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 428830 |
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| End bp | 430107 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641663139 |
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| Product | monooxygenase FAD-binding |
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| Protein accession | YP_001789430 |
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| Protein GI | 171057081 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0644] Dehydrogenases (flavoproteins) |
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| TIGRFAM ID | [TIGR02032] geranylgeranyl reductase family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0398453 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTCACG ACCCGCCCCT GCCCGACCCC GACCTGGCGC GCCGCGCCCT GCCACGCGCG
CCGTTGCCCG CGGACTGCGA GGTGCTGGTG GTCGGCGCCG GCCCGGCCGG CAGCGCCTGC
GCCACCTGGC TGGCGCGTGC CGGGGTCGAC GTGGTGCTGG TCGATCAGCA CGATTTCCCG
CGCGACAAGG TCTGCGGCGA CGGCCTGATC CCCGATGCCC ACGCCGCGCT GGCGCGGCTG
GGCGTGCTCG ACGCGGTGAT GGCGCAGGCG CAGCCGATCG GCCATGTGCG CTGCGTCGCG
CCGCGTGGGG GTCAGGTCGA CGTCGCCGGC CGGCTGGCGG TGCTGCCGCG GCGCATCCTC
GACCACCTGC TGGTGCGCCA CGCCCAGGCC GGCGGCGCGC GGCTGCACAC ACCGGTGAAG
TTCGAGGGTC TGATCGAAGA CGGCGGCCGG GTGCGCGGTG CGCGGCTGCG CCAGGCCGGC
GCCGACACGA TCCACGAACT GCGCGCCGGC TGGGTCGTGC TGGCCACCGG CGCGGCGATG
CCGGCGATGC TCGGCGCCGG CCTGTGCGAG CGCCGTGCGC CCAGCGGCGT GGCGTTGCGC
GCGCATGTGC GCAACCCGGC GCTGGCCGGA CGGCAGACCA CGATGGACGT GGTCTGGCAC
CGGGCGCTGA GCCCCGGCTA CGGCTGGATC TTCCCGTGCG GCGGCGACGT CTACAACATC
GGCGTGGGCT CGTTCTTCAA GCGCGACGCC AGCACCGACG CCGCCAATCT GCGCGACATG
TTCGACGCCT TCACGCGCGT CCACGCCCCG GCGCAGGCGC TGATGCAGGG CGGCGAGTGG
GTCAGCGAGC TCAAGGGCGC ACCGCTGCGC TGCACGCTGG CGGGCGCGCG GACCGGCCGG
CCCGGCCTGC TGGCCACCGG CGAGGCGATC GGCTCGACCT ACGACTTCAC CGGCGAAGGC
ATCGGCAAGG CGCTCGAGAC CGGCCTGATG GCGGCCGAGG CGCTGCTGGC CGGGCGCGCG
CAGGGCTCGG CGGCGGCACC GGCCGATGCG CAGACGCTGG CCGACTACGA CGCCCGCCTG
GCGACCCTGA AACCGCGTTT TTCGCTCTAT GCGCGGGCCA ACCACATCAA CCGCTACCCG
TGGCTGGCCG ACCTGGTGAT CTGGCGCGCC CGGCGCAGCC CGGGCATGCG CCAGCGCATG
AGCGGCCTGC TCAACGAGAC CAGCAACCCC GGCACCCTGA TCTCGCTGCG TGGCATGCTG
AAACTCTTCA CCGTCTGA
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| Protein sequence | MPHDPPLPDP DLARRALPRA PLPADCEVLV VGAGPAGSAC ATWLARAGVD VVLVDQHDFP
RDKVCGDGLI PDAHAALARL GVLDAVMAQA QPIGHVRCVA PRGGQVDVAG RLAVLPRRIL
DHLLVRHAQA GGARLHTPVK FEGLIEDGGR VRGARLRQAG ADTIHELRAG WVVLATGAAM
PAMLGAGLCE RRAPSGVALR AHVRNPALAG RQTTMDVVWH RALSPGYGWI FPCGGDVYNI
GVGSFFKRDA STDAANLRDM FDAFTRVHAP AQALMQGGEW VSELKGAPLR CTLAGARTGR
PGLLATGEAI GSTYDFTGEG IGKALETGLM AAEALLAGRA QGSAAAPADA QTLADYDARL
ATLKPRFSLY ARANHINRYP WLADLVIWRA RRSPGMRQRM SGLLNETSNP GTLISLRGML
KLFTV
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