| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0372 |
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| Symbol | |
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| ID | 6163778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 406581 |
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| End bp | 407465 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641663121 |
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| Product | phage SPO1 DNA polymerase-related protein |
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| Protein accession | YP_001789412 |
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| Protein GI | 171057063 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1573] Uracil-DNA glycosylase |
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| TIGRFAM ID | [TIGR00758] uracil-DNA glycosylase, family 4 |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.000046016 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCGTGGA CTGAACGCCA GCGGGCGATG CTCGGCGAGA TCGGCATCCG GCTGTGGCCG
TCGCCGCAGG CCGGGGCCGC TGAAACGCCG GCCGCGCCGC CGGCTGCCGT GCCGGTGGTG
CCCGTCGCCC GATCGCTGGC CCAGCCGGCG CCGGGCTTGG CCGTGCCCAC GGCGGCCAAC
CCTGCGCCGA GTGCGACCGC ACCGCCGCCA TCCGTTGTCC GTCCGCGAGT CGACCCCGCA
CCGGCCGCAC CGGCCGCACC GCTGGCCCGG CCCGGCGGCC TGATCCAGGC TGCGCCGGCC
GGCGCGGTGT CGGCGCTGGA CTGGCCCGAG CTGCAGGCGG TGGTCGAGGC CTGCCGGGCC
TGCGGCTTGT GCGAGAGCCG GCGCCAGACC GTGTTCGGCG TCGGCCATCA CCAGGCGCAC
TGGATGCTGG TCGGCGAGGC GCCGGGCGAG CAGGAGGATC TGCAGGGCGA GCCCTTTGTC
GGCAAGGCCG GCCAGCTGCT CGACAACATG CTGCGTGCGG TCGGCCTGAC CCGCGAGCAG
GCCGAGCCGG CGCGGCAGGT CTACATCGCC AACGTCCTGA AGTGCCGTCC GCCCGGTAAC
CGCAACCCCG ATCCGCAGGA GGTGCAGCGC TGCGAGCCTT TCCTGCAACG CCAGGTCGAG
CTGGTGCGCC CGCGCCTGAT CCTGGCGATG GGGCGGTTCG CGGTGCAGTC GCTGCTCAAG
ACCTCGGAGC CGATCGGCCG CCTGCGTGGC AAGTCGCATC ACTACCACGG CGTGCCGGTG
GTGGTGACCT ATCACCCGGC CTATCTGCTG CGCAACCCGC TCGACAAGGC GCGCGCCTGG
GAAGACCTCT GCCTGGCGCG TGAGCTGATC CAGGCCGCGG CCTAG
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| Protein sequence | MPWTERQRAM LGEIGIRLWP SPQAGAAETP AAPPAAVPVV PVARSLAQPA PGLAVPTAAN
PAPSATAPPP SVVRPRVDPA PAAPAAPLAR PGGLIQAAPA GAVSALDWPE LQAVVEACRA
CGLCESRRQT VFGVGHHQAH WMLVGEAPGE QEDLQGEPFV GKAGQLLDNM LRAVGLTREQ
AEPARQVYIA NVLKCRPPGN RNPDPQEVQR CEPFLQRQVE LVRPRLILAM GRFAVQSLLK
TSEPIGRLRG KSHHYHGVPV VVTYHPAYLL RNPLDKARAW EDLCLARELI QAAA
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