| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0366 |
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| Symbol | |
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| ID | 6162689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 400365 |
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| End bp | 401585 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641663115 |
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| Product | phosphoribosylaminoimidazole carboxylase ATPase subunit |
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| Protein accession | YP_001789406 |
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| Protein GI | 171057057 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0026] Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) |
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| TIGRFAM ID | [TIGR01161] phosphoribosylaminoimidazole carboxylase, PurK protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.000015812 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACGTCGA CCTCCCACGT CATCCCGACC CTGCTGCCCG GCCAGGCCTC GCCGGCTGCG
CCGCAGCGCC TGGCCACGCT CGGCGTGATG GGCGGCGGCC AGCTCGGGCG CATGTTCGTG
CACGCCGCGC AGCAGCTCGG TTTCCGCACC GCGGTGCTCG AACCTGACGC CACCAGCCCG
GCCGGCCTGG TCGCCCACGC GCATGTGGTG AGCGACTACC TCGACGCCGC CGGGCTCGAT
CGCCTGGCCG ACGAGGCCGA CGCCATCACC ACCGAGTTCG AGAACGTGCC CGCCCAGGCG
CTGCGCCAGC TCGCCTTGCG CCGGCCGGTG GCGCCCGCGG GTGACGTGGT CGCGGTCTGC
CAGGACCGCG CCGCCGAGAA GGCGCATTTC GCCGCCAGCG GCGTGCCCTG CGCGCGCAAC
CACCTGATCG AGACCGAAGC CGACCTGGCT GCGGTCGACG CCGCGCTGCT GCCCGGCATC
CTCAAGACCG CGCGCCTCGG TTACGACGGC AAGGGCCAGC GCCGCGTGTC TGACCGCGCC
GAGCTGGCCG CCGCGTGGCG CGAGCTGCAA GGCGTGCCGT GCCTGCTCGA ACAGATGTTG
CCGCTGGCGC AGGAGCTGAG CGTGATCGTC GCCCGCTCGG CCACCGGCGA GCTGGTGCAC
CTGCCGGTGC AGCAGAACCT GCACCGCGAC GGCATCCTCG CCGTCACCGT CGTGCCCGCG
CCCGACATCG ATGCCGCGAC GCAGGCCGAA GCGGTGGCCG CGGCCGGCCG CATCGCGCAC
GAACTGGCCT ACGTGGGCGT GCTCTGCATC GAGTTCTTCG TGCTCGCCGA CGGCCGGCTG
GTGGCCAACG AGATGGCGCC GCGGCCGCAC AACTCCGGCC ATCACAGCGT CGACAGCTGC
GATATCTCGC AGTTCGAGCT GCAGGTGCGC ACGCTCGCCG GCCTGCCGCT GGCCGAGCCG
CGCCTGCATT CGAGCGCGGT GATGCTCAAT CTGCTGGGCG ACCTCTGGTT CGACGCCGCC
GCGGGTGCCG ATGCCGCCGA GCGCACGCCC GACTGGCGGC CGATCCTGGC GCTGCCCGGC
GCGCACCTGC ACCTGTACGG CAAGCAGTCG GCGCGGCGGG GCCGCAAGAT GGGCCACCTG
ACCTTCACCG CGGCCTCCCC GCAGGCCGCG CGTGATGTTG CCCTGCAGGC CGCGGCGCTG
CTCGGCATCG AGCCGTTCTG A
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| Protein sequence | MTSTSHVIPT LLPGQASPAA PQRLATLGVM GGGQLGRMFV HAAQQLGFRT AVLEPDATSP
AGLVAHAHVV SDYLDAAGLD RLADEADAIT TEFENVPAQA LRQLALRRPV APAGDVVAVC
QDRAAEKAHF AASGVPCARN HLIETEADLA AVDAALLPGI LKTARLGYDG KGQRRVSDRA
ELAAAWRELQ GVPCLLEQML PLAQELSVIV ARSATGELVH LPVQQNLHRD GILAVTVVPA
PDIDAATQAE AVAAAGRIAH ELAYVGVLCI EFFVLADGRL VANEMAPRPH NSGHHSVDSC
DISQFELQVR TLAGLPLAEP RLHSSAVMLN LLGDLWFDAA AGADAAERTP DWRPILALPG
AHLHLYGKQS ARRGRKMGHL TFTAASPQAA RDVALQAAAL LGIEPF
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