Gene Lcho_0361 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0361 
Symbol 
ID6163664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp395625 
End bp396689 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content67% 
IMG OID641663110 
Productfructose-1,6-bisphosphate aldolase 
Protein accessionYP_001789401 
Protein GI171057052 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0191] Fructose/tagatose bisphosphate aldolase 
TIGRFAM ID[TIGR00167] ketose-bisphosphate aldolases
[TIGR01521] fructose-bisphosphate aldolase, class II, Calvin cycle subtype 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.000396687 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCACTCG TCTCGATGCG CCAACTGCTC GACCATGCCG CCGAAAACGG CTACGGCATT 
CCGGCGTTCA ACGTCAACAA CCTGGAACAG GTGCAGGCCG TGATGGCCGC GGCCGCCGAA
GTCGGCGCGC CGGTGATCCT GCAAGCCAGC GCAGGTGCCC GCAAGTACGC CGGCGAGGCC
TTCATCAAGC ACCTGATCCA GGCGGCTGTC GAGGCCTACC CGCACATCCC GCTGGTGATG
CACCAGGACC ACGGCCAGAC CCCGGCGATC TGCCAGGGCG CGATCAACCT GGGCTTCGGC
TCGGTGATGA TGGACGGCTC GCTGCGCGAG GACGGCAAGA CCCCGGCCGA CTTCGCCTAC
AACGTCGACG TGACCCGCAA GGTGGTCGAC ATGGCGCACG CGGTGGGTGT CACGGTCGAA
GGCGAACTCG GCTGCCTGGG TTCGCTCGAG ACCGGTGAAG CCGGCGAGGA AGACGGCATC
GGCGCGGTCG GCAAGCTCGA CCACAGCCAG ATGCTGACCG ACCCCGAGGA GGCGGCCCAG
TTCGTCAAGG CGACCCAGCT CGACGCGCTG GCGATCGCCA TCGGCACCAG CCACGGCGCC
TACAAGTTCA CCCGCCCGCC CACCGGCGAC GTGCTGGCGA TCTCGCGCGT CAAGGAGATC
CACGCCCGCA TCCCCAACAC CCACCTGGTG ATGCACGGTT CGTCGAGCGT GCCGCAGGAC
CTGCTGGCCC TCATCAACCA GTACGGCGGC AAGATGAAGG AAACCTACGG CGTGCCGGTC
TCCGAGATCC AGGAAGCGAT CAAGTTCGGC GTGCGCAAGA TCAACATCGA CACCGACATC
CGCCTGGCGA TGACGGCTGC GGTGCGCAAG TTCATGGCCG AGAACCCCGA GAAGTTCGAC
GCCCGCGAGT GGCTCAAGCC GGCGCGCGAG GCGGCCACGA AGATCTGCAA GCAGCGCTAC
ATCGAGTTCG GCTGCGAAGG CCAGGCCGGC AAGATCAAGG CGGTCGGCCT CGACGAGATC
GCCCGCCGCT ACGCCAGCGG CGCGCTGGCG CAGCAGGTGC TCTGA
 
Protein sequence
MSLVSMRQLL DHAAENGYGI PAFNVNNLEQ VQAVMAAAAE VGAPVILQAS AGARKYAGEA 
FIKHLIQAAV EAYPHIPLVM HQDHGQTPAI CQGAINLGFG SVMMDGSLRE DGKTPADFAY
NVDVTRKVVD MAHAVGVTVE GELGCLGSLE TGEAGEEDGI GAVGKLDHSQ MLTDPEEAAQ
FVKATQLDAL AIAIGTSHGA YKFTRPPTGD VLAISRVKEI HARIPNTHLV MHGSSSVPQD
LLALINQYGG KMKETYGVPV SEIQEAIKFG VRKINIDTDI RLAMTAAVRK FMAENPEKFD
AREWLKPARE AATKICKQRY IEFGCEGQAG KIKAVGLDEI ARRYASGALA QQVL