Gene Lcho_0358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0358 
Symbol 
ID6163661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp391033 
End bp391371 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content66% 
IMG OID641663107 
Producthypothetical protein 
Protein accessionYP_001789398 
Protein GI171057049 
COG category[S] Function unknown 
COG ID[COG2361] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0316504 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGCTG ACGACCGCAT CCGGATTCGG CACATGGTCG ATGCGGCCAA CGCCGCTCGC 
GGCTTCCTGT CCGGTCGGCA GCGCGCCGAC CTCGATACCG ACCAGATGCT GCTGTTTGCC
GTGGTGCGAG CCATCGAGAT CATCGGCGAG GCTGCCGCGC GGGTCTCCCC GGAATGTCGT
GCCGCCGTGC CGGGCGTGCC CTGGCCGGCC ATCATCGGCA TGCGCAATCG CATGGTGCAT
GCGTATTTCG ACATCGACCA CGATGTGGTG TGGCAGACGG TGCAGGTCGA ACTGGCGCCG
CTGATGTCGG TCTTGCAGGC CGCGTTGAAT CGGCCTTGA
 
Protein sequence
MQADDRIRIR HMVDAANAAR GFLSGRQRAD LDTDQMLLFA VVRAIEIIGE AAARVSPECR 
AAVPGVPWPA IIGMRNRMVH AYFDIDHDVV WQTVQVELAP LMSVLQAALN RP