| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0356 |
|---|
| Symbol | |
|---|
| ID | 6162826 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | + |
|---|
| Start bp | 390155 |
|---|
| End bp | 390637 |
|---|
| Gene Length | 483 bp |
|---|
| Protein Length | 160 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641663105 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001789396 |
|---|
| Protein GI | 171057047 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.0198586 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCGTTTG TCGCAGTCCT CGTCGATTGC GACAACACAG CGCCGGATGT GCTGGAGCAC
GCGTTACGCG TGGTCGCGCA ATTTGGACAG GTCGTGCTGC GGCGGGGGTA TAGCAGTCAC
ACGACGCTCG CCAACAAATG GCAGGAAGCG CTGGTGCGGC TGGCGTTCAC GCCATGTCTG
CAATTTCAAT ACGCGGCTGG CAAGAACACC TCGGACATTG CTTTGGCTCT GGACGCGTTG
GAGGCGATGT TCGATCGCCG GTCAGACACC TTTTGTCTGG TGACCAGCGA TTCGGATTTC
GCGTATCTGG GCGGGCTGGG CCAGTACCTG AAGCGGACCG ACCCGGCCTT TTCGCCGAAG
ACCGACGGGC ACTGCGGACT GCTCGACATG CTGCGCACCT ACGACCTGCT GGTGGTGCAG
CAGGAGCCCG GTGGGCACTG GACTGTGCGG CTCGAGCCCA GGGCGGAAGG CGAAGAGGGC
TGA
|
|---|
| Protein sequence | MAFVAVLVDC DNTAPDVLEH ALRVVAQFGQ VVLRRGYSSH TTLANKWQEA LVRLAFTPCL
QFQYAAGKNT SDIALALDAL EAMFDRRSDT FCLVTSDSDF AYLGGLGQYL KRTDPAFSPK
TDGHCGLLDM LRTYDLLVVQ QEPGGHWTVR LEPRAEGEEG
|
|---|
| |