Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0351 |
Symbol | |
ID | 6162821 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 385976 |
End bp | 386944 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641663100 |
Product | methionyl-tRNA formyltransferase |
Protein accession | YP_001789391 |
Protein GI | 171057042 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0223] Methionyl-tRNA formyltransferase |
TIGRFAM ID | [TIGR00460] methionyl-tRNA formyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.227981 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGAGTC TGCGGGTCGC GTTTGCCGGC ACGCCGGAGT TCGCGCGTGC CGCCCTGGCG CGCATCCATG CAGCCGGCCA CGACGTGCCG CTGGTGCTGA CGCAGCCCGA CCGGCCGGCC GGTCGTGGCA TGAAGCTGCA GGCCTCGCCG GTCAAGCAGC TGGCGCTCGA TCTCGGTGTG CCGGTCGCCC AGCCCATGAG CCTGCGGCTC GACGGCAAGT ACCCGGCCGA GGCGGCGGCT GCGCAGGCTG CGCTGCTGGC GGCGCAGATC GACGTGATGG TGGTGGCCGC CTACGGCCTG ATCCTGCCGG CCTGGGTGCT CGAACTGCCA CGCCTGGGCT GCCTGAACAT CCACGCCTCG CTGCTGCCGC GCTGGCGCGG CGCGGCGCCG ATCCACCGCG CCATCGAGGC CGGTGACACG CAGACCGGCA TCACGCTGAT GCAGATGGAC CAGGGCCTCG ACACCGGCGC GATGCTGCTG ACCGCCGTCG AGCCGATCGG CCCGGCCGAC ACCACCGCGA GCCTGCACGA CCGGCTCGCC GTGCTGGGCG CCGAGCTGGT GCTGCAGGCG CTCGACGCCG CGGCCGCCGG CACCTTGCAG CCGGTGGTGC AGCCGCTCGA AGGCGTGACC TACGCCCACA AGATCGACAA GCGCGAGGCG CCGATCGACT GGTCGCTGCC GGCGGCCGTG ATCGAGCGTC GGGTGCGTGC CTTCGATCCG TTTCCCGGCG CCACCTTCAG CCTGGGCGGC GACACGCTCA AGCTCTGGTC GGCGCAGGTG GTCGACCTGC CGGCCGGTCA CGGTCATGCC GCCGGCGAGG TGATCTCGAC CGAGGGCGGC ACGCCGCTCG TCGCCTGCGG CGAGGGCGCC CTGGCCTTGA CGCAATTGCA ACGGGCCGGC GGCAAGCGGC TGAGCGGGCG CGACTATCTG CAGGCCCGGC CGGTCGTGGT CGGCGTGCGG GCCGGTTGA
|
Protein sequence | MTSLRVAFAG TPEFARAALA RIHAAGHDVP LVLTQPDRPA GRGMKLQASP VKQLALDLGV PVAQPMSLRL DGKYPAEAAA AQAALLAAQI DVMVVAAYGL ILPAWVLELP RLGCLNIHAS LLPRWRGAAP IHRAIEAGDT QTGITLMQMD QGLDTGAMLL TAVEPIGPAD TTASLHDRLA VLGAELVLQA LDAAAAGTLQ PVVQPLEGVT YAHKIDKREA PIDWSLPAAV IERRVRAFDP FPGATFSLGG DTLKLWSAQV VDLPAGHGHA AGEVISTEGG TPLVACGEGA LALTQLQRAG GKRLSGRDYL QARPVVVGVR AG
|
| |