Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0348 |
Symbol | |
ID | 6160693 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 382955 |
End bp | 384094 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641663097 |
Product | DNA protecting protein DprA |
Protein accession | YP_001789388 |
Protein GI | 171057039 |
COG category | [L] Replication, recombination and repair [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0758] Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake |
TIGRFAM ID | [TIGR00732] DNA protecting protein DprA |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.083083 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGATCGCG ACGAACTGGC CGCCTGGCTG CAACTGCTCG AGACACCCGG CGTCGGCCGC CAGAGTGCAC GCCGGCTGCT GGCGGCGTTC GGCAGCCCGC AAGCGGTGCT CTCGGCCAGC GTGTCGGCCC GCGCCGGCGT GATCGACAAG GCGACCGCCG CCAAGCTCGA GCAGGCCCCC GAGGGCCTGG CGTTGCTGGT GGAGCGCACC GCCGCGTGGC TGACTGGCGA ACCCGGGCGC CGGATCCTGA CCCTGGCAGA CCCCGCCTAT CCCTCGATCT GGCTGAATCT GCCCGACCCG CCGCTGCTGC TCTACGCACA GGGCAAGCTC GACTTGCTGC AACGCCCGGC GCTGGCGATC GTCGGCAGCC GCCACCCGAC ACCCGAGGGC ACCGACAACG CCCGCGCGTT CGCGGCCTCG CTCAGCCGGA CCGGCCTGAC CATCGTGTCC GGCCTGGCCG CGGGCATCGA CGGAGCCGCC CACGAAGGCG CACTGGGCGG CACCGGCAGC ACGATCGCAC TGGTCGGCAC CGGGCTGGAT CGGGTCTACC CGCGCGCCCA TCTGAAACTG GCGCGCGAGA TCGCCGATCG CGGCCTGCTG CTGAGCGAGT TCTCCATCGG CACGCCACCG CTGGCGGCCC ACTTCCCGCT GCGCAACCGC CTGATCGCCG GCCTGGGCAT GGGCACGCTG GTGGTCGAGG CGGCGCTGAA ATCGGGTTCG CTGATCACGG CGCGGCTCGC ATCGGAATTC GGCCGCGAGG TGTTCGCCAT CCCCGGCTCG ATCCACAACC CGCAGTCACG CGGCTGTCAC GCCCTGATCC GCCAGGGCGC CAAGCTGGTC GAGAGCACGC AGGACGTGCT CGAAGAACTC CATCTGGCCG TCCCCGCAGC GGCAGTCAGC ACCGGCCCTG CACACGCGGA ACCGGCCGCA GAGCAACCCG ACGACGCCAA CCCGCCCCCT GATGACGTCG ACGACCCGAT CCTGCTGGCC CTGGGCTGGA GCGCCGCCAC CCTGGACGTG CTGCAGGCGC GCACGGGCTG GGCGACCGCC GAACTCAACG TGCACCTGCT CGATCTCGAA TTGAGCGGCC AGGTCGTGCG CCTGCCGGGG CAGCTGTTCC AGCGCCGGGC GCAGGCATGA
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Protein sequence | MDRDELAAWL QLLETPGVGR QSARRLLAAF GSPQAVLSAS VSARAGVIDK ATAAKLEQAP EGLALLVERT AAWLTGEPGR RILTLADPAY PSIWLNLPDP PLLLYAQGKL DLLQRPALAI VGSRHPTPEG TDNARAFAAS LSRTGLTIVS GLAAGIDGAA HEGALGGTGS TIALVGTGLD RVYPRAHLKL AREIADRGLL LSEFSIGTPP LAAHFPLRNR LIAGLGMGTL VVEAALKSGS LITARLASEF GREVFAIPGS IHNPQSRGCH ALIRQGAKLV ESTQDVLEEL HLAVPAAAVS TGPAHAEPAA EQPDDANPPP DDVDDPILLA LGWSAATLDV LQARTGWATA ELNVHLLDLE LSGQVVRLPG QLFQRRAQA
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