| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0321 |
|---|
| Symbol | metX |
|---|
| ID | 6161445 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | + |
|---|
| Start bp | 347393 |
|---|
| End bp | 348526 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641663070 |
|---|
| Product | homoserine O-acetyltransferase |
|---|
| Protein accession | YP_001789361 |
|---|
| Protein GI | 171057012 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2021] Homoserine acetyltransferase |
|---|
| TIGRFAM ID | [TIGR01392] homoserine O-acetyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGACAC TCGGCCACGT CACGGCCCAG CAGATGTCCT TCAGCGACGC GCTGCCGCTG
CGCAGCGGCG CCGCCTTGCG CGACTACACG CTGGTCTACG AAACCTACGG CACGCTCAAC
GCCGACCGCA GCAACGCGGT GCTGGTGTGC CACGCGCTCA ACGCCAGCCA CCACGTCGCC
GGCACCTACG CCGACAGCGA CCGCAGCGAA GGCTGGTGGG ACAACCTGAT CGGCCCCGGC
AAGCCGCTGG ACACCAACCG GTTCTTCGTC ATCGGCGTCA ACAACCCGGG TTCGTGTTTC
GGCTCGACCG GCCCGACCCA TCCCAATCCC GCCACCGGCC GGCCCTACGG CGCCGATTTT
CCGGTCGTGA CGGTCGAGGA CTGGGTCGAC GCCCAGGCCC GCCTGCTCGA CGGCCTCGGC
ATCGAGCGGC TGGCCGCCGT GATCGGCGGC AGCCTGGGCG GCATGCAGGC GCTGAGCTGG
ACGCTGCGCC ATCCGGCGCG GGTCGGCCAC GCGCTGATCA TCGCCAGCGC GCCCAACCTG
TCGGCGCAGA ACATCGCCTT CAACGAGGTG GCGCGCCGGG CCATCATCAC CGACCCCGAT
TTCCACGCCG GCCACTTCTA CGCCCACGGC GTGGTCCCGA AGCGCGGCCT GCGGGTGGCG
CGCATGATCG GTCACATCAC CTACCTCAGC GACGACTCGA TGGAGGCCAA GTTCGGCCGC
GCCCTGCGCA GCGCCGAGCT GGCCTACAGC ACCCAGGAGA TCGAGTTCCA GATCGAGAGC
TACCTGCGCT ACCAGGGCGA CAAGTTCAGC GAGTACTTCG ACGCCAACAC CTACCTGCTG
ATCACCCGTG CGCTGGATTA TTTCGACCCG GCACGCGAGT TCGGCGGCAA CCTGAGCGCG
GCGCTGGCCG TCGCACGGGC GAAGTTCCTG GTCGTCAGCT TCACCACCGA CTGGCGCTTC
TCGCCGCTGC GCTCGCGCGA GATCGTCAAG GCGCTGCTCG ACAACCGCCG CGACGTCAGC
TATGCCGAGA TCGCGGCCCC GCACGGCCAC GATGCCTTCC TGCTCGACGA CCCGCGCTAT
CACGGCGTGC TGCGGGCCTA TTTCGAGCGT GTCGCCCAGG AGCTGCCCCG ATGA
|
|---|
| Protein sequence | MVTLGHVTAQ QMSFSDALPL RSGAALRDYT LVYETYGTLN ADRSNAVLVC HALNASHHVA
GTYADSDRSE GWWDNLIGPG KPLDTNRFFV IGVNNPGSCF GSTGPTHPNP ATGRPYGADF
PVVTVEDWVD AQARLLDGLG IERLAAVIGG SLGGMQALSW TLRHPARVGH ALIIASAPNL
SAQNIAFNEV ARRAIITDPD FHAGHFYAHG VVPKRGLRVA RMIGHITYLS DDSMEAKFGR
ALRSAELAYS TQEIEFQIES YLRYQGDKFS EYFDANTYLL ITRALDYFDP AREFGGNLSA
ALAVARAKFL VVSFTTDWRF SPLRSREIVK ALLDNRRDVS YAEIAAPHGH DAFLLDDPRY
HGVLRAYFER VAQELPR
|
|---|
| |