Gene Lcho_0290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0290 
Symbol 
ID6160880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp307358 
End bp307942 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content68% 
IMG OID641663034 
Productacetyltransferase 
Protein accessionYP_001789330 
Protein GI171056981 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1207] N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCACT GGCAACACGA ATCAGCCATC GTCGACCCCG GCGCACAGCT GGGCGAGGGC 
ACCAAGGTCT GGCACTTCAG CCACGTCTGC CCGGGCGCGC GCATCGGCGA CAACTGCTCG
CTGGGCCAGA ACGTCTTCAT CGCCAACGAC GTGTCGATCG GCCACGGCGT GAAGATCCAG
AACAACGTCT CGGTCTACGA CGCGGTGACG CTCGAAGACG ACGTGTTCGT CGGCCCGAGC
GTGGTCTTCA CCAACGTCTA CAACCCGCGT GCGGCGGTGT CGCGCAAGAG CGAGTACCTG
CAAACGCGGG TCAAGCGCGG CGCCACGCTG GGCGCCAACT GCACCATCGT CTGCGGCACC
ACGATCGGCG AATACGCCTT CGTCGGCGCC GGCGCAGTGA TCACGCGCGA CGTGCCCGCC
TACGCCCTGA TGGCCGGCGT GCCCGCGCGG CGCATCGGCT GGATGAGCCG CAACGGCGAG
CGGCTCGGGT TGCCGGTGCA TGGCGAGGAC GAGGCGGTGT GCCCGGTGAC GGGGGAGCGG
TATCGGTTGC GGGGGGATGT GGTGACGCGG GTCTCCACAT CATGA
 
Protein sequence
MNHWQHESAI VDPGAQLGEG TKVWHFSHVC PGARIGDNCS LGQNVFIAND VSIGHGVKIQ 
NNVSVYDAVT LEDDVFVGPS VVFTNVYNPR AAVSRKSEYL QTRVKRGATL GANCTIVCGT
TIGEYAFVGA GAVITRDVPA YALMAGVPAR RIGWMSRNGE RLGLPVHGED EAVCPVTGER
YRLRGDVVTR VSTS