| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0281 |
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| Symbol | |
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| ID | 6160343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 295377 |
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| End bp | 297548 |
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| Gene Length | 2172 bp |
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| Protein Length | 723 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641663025 |
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| Product | catalase/peroxidase HPI |
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| Protein accession | YP_001789321 |
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| Protein GI | 171056972 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0376] Catalase (peroxidase I) |
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| TIGRFAM ID | [TIGR00198] catalase/peroxidase HPI |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCCCA AGACCTCTGC CGGACAATGC CCGGTCATGC ACGGCGCCAA CACCACGGCG
GCCCAGTCCA ACACCGCCTG GTGGCCGAAC GCGCTGAACC TGGACATCCT GCACCAGCAC
GACACCAAGA CCAATCCGCT CGGTGAGGGC TACCGCTACC GCGAGGCCGT CAAGCAGCTC
GACGTCGCCG CGCTGAAGGC CGACCTCACC GCGCTGATGA CCCGCAGCCA GCCCTGGTGG
CCGGCCGACT GGGGCCATTA CGGCGGCCTG ATGATCCGCA TGGCCTGGCA CGCCGCCGGC
TCCTACCGCG TCGCCGACGG CCGCGGCGGC GCCGGCACCG GCAACCAGCG CTTTGCGCCG
CTGAACTCGT GGCCCGACAA CGCCAACCTC GACAAGGCGC GCCGCCTGCT GTGGCCGATC
AAGAAGAAGT ACGGCGCGAA GATCAGCTGG GCCGACCTGA TCGTCCTGGC CGGCAACGTG
GCCTACGAGT CGATGGGCCT GAAGACCTAC GGTTTCGCCT TCGGCCGCGA GGACATCTGG
CACCCCGAGA AGGACATCTA CTGGGGCTCC GAGAAGGCCT GGCTGGCGCC CACCGGCGGC
GAAGGCAGCC GCTACTCCGG CCAGCGCGAC CTCGAGAACC CGCTGGCGGC GGTGATGATG
GGCCTGATCT ACGTCAACCC CGAGGGCGTG GACGGCCAGC CCGACCCGCT CAAGACCGCG
CAGGACGTGC GCGTCACCTT CGCCCGCATG GCGATGGACG ACGAGGAAAC CGTGGCGCTG
ACCGCCGGCG GCCACACCGT GGGCAAGTCC CATGGCAACG GCAGTGCCGC CAACCTGGGT
CCGGCTCCCG AAGGCGCCGA CGTGCACGAG CAGGGCCTGG GCTGGAACAA CCACAGCTCG
CGCGGCATCG GTCGCGACAC CGTCACCAGC GGCATCGAAG GCGCCTGGAC CACGCACCCC
ACGCAGTGGG ACAACGGCTA CTTCAAGCTG CTGCTCGGCT ACGACTGGGA GCTCAAGAAG
AGCCCGGCCG GCGCCTGGCA GTGGGAGCCC GTGGGCATCA AGGAAGACGA CAAGCCCGTC
GATGTGGAAG ACCCCTCGAT CCGCCTGAAC CCCATCATGA CCGACGCCGA CATGGCGATG
AAGATGGACC CGGCGTACCG CCGGATCAGC GAGCGCTTCG CCGCCGACCA GGCGTATTTC
AGCGAGGTCT TCGCGCGCGC CTGGTTCAAG CTGACCCACC GCGACCTCGG CCCCAAGAGC
CGCTACATCG GCCCGGAGAT CCCGGCCGAA GACCTGCTCT GGCAGGACCC GGTGCCGGTG
GGCCCGACCG CCTACGACGT CGGCGCCGTC AAGTCGCGCA TCGCCACCAG CGGCCTGTCC
GTCGGTGAAC TGGTCGCCAC CGCCTGGGAC AGCGCCCGCA CCTGGCGCGG CTCCGATTAC
CGCGGCGGCG CCAACGGCGC GCGCATCCGC CTGGCGCCGC AGAAGGATTG GGCCGGCAAC
GAGCCCGAGC GGCTGGCCCG CGTGCTGGCG GTGCTCGAGC CCATCGCTGC CGCCGCCGGC
GCCAGCGTGG CCGACGTCAT CGTGCTGGCC GGCAACGTGG GCGTCGAACT TGCCGCCAAG
GCGGCCGGGT TCGACGTCAC CGTGCCTTTC GCCCCGGGCC GTGGTGATGC GACCCAGGCG
CAGACCGATG TCGAGTCCTT CGAGGTCCTG GAGCCGGTGG CCGACGGTTT CCGCAACTGG
CAGCAGAGGT CCTTTGCCGT CCAGCCCGAG GAGATGCTGC TCGACCGGGC CCAGCTGATG
GGCCTGTCTG CACCCGAGAT GACGGTGCTG GTCGGCGGCC TGCGCGTGCT GGGCGCCAAC
CACGGCGGAT CGAAGCACGG CGTCTTCACC GATCGCGTCG GCGCGCTTAC GAACGACTTC
TTCGTCACCC TCACCGACAT GGCTCATGCC TGGGTGCCCA CCGGCCGCAA CAGCTACGAG
ATCCGCGAGC GCGCCAGCGG TGTGGTGAAG TACACCGCCA CCCGCGCCGA CCTGGTGTTC
GGCTCCAACT CGGTGCTGCG CGCCTACGCC GAGGTCTACG CCCAGGACGA CAGCCGCGAG
AAGTTCGTGC GCGACTTCGT CGCCGCCTGG GTCAAGGTGA TGAACGCCGA CCGCTACGAG
CTGCAGGGCT GA
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| Protein sequence | MDPKTSAGQC PVMHGANTTA AQSNTAWWPN ALNLDILHQH DTKTNPLGEG YRYREAVKQL
DVAALKADLT ALMTRSQPWW PADWGHYGGL MIRMAWHAAG SYRVADGRGG AGTGNQRFAP
LNSWPDNANL DKARRLLWPI KKKYGAKISW ADLIVLAGNV AYESMGLKTY GFAFGREDIW
HPEKDIYWGS EKAWLAPTGG EGSRYSGQRD LENPLAAVMM GLIYVNPEGV DGQPDPLKTA
QDVRVTFARM AMDDEETVAL TAGGHTVGKS HGNGSAANLG PAPEGADVHE QGLGWNNHSS
RGIGRDTVTS GIEGAWTTHP TQWDNGYFKL LLGYDWELKK SPAGAWQWEP VGIKEDDKPV
DVEDPSIRLN PIMTDADMAM KMDPAYRRIS ERFAADQAYF SEVFARAWFK LTHRDLGPKS
RYIGPEIPAE DLLWQDPVPV GPTAYDVGAV KSRIATSGLS VGELVATAWD SARTWRGSDY
RGGANGARIR LAPQKDWAGN EPERLARVLA VLEPIAAAAG ASVADVIVLA GNVGVELAAK
AAGFDVTVPF APGRGDATQA QTDVESFEVL EPVADGFRNW QQRSFAVQPE EMLLDRAQLM
GLSAPEMTVL VGGLRVLGAN HGGSKHGVFT DRVGALTNDF FVTLTDMAHA WVPTGRNSYE
IRERASGVVK YTATRADLVF GSNSVLRAYA EVYAQDDSRE KFVRDFVAAW VKVMNADRYE
LQG
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