| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0260 |
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| Symbol | |
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| ID | 6160579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 275673 |
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| End bp | 276581 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641663004 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001789300 |
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| Protein GI | 171056951 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.026779 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCGCA TCACCGGCGT ACAGCTTTTC ATCCGCATCG TCGAGACCGC CAGCTTCAGC
AAGGCGGCCG CCGAGTTCGG CATCACGCAG CCGACCGCCA CCAAGTCGGT CGCCGCGATG
GAGCAGCGAC TGGGCGCGCG GCTGCTGCAC CGCTCGACCC GCGGCGTCAC GCCCACCGAG
GTCGGCGCGC TCTATTACGA CAAGTGCAAG CTGATCGCCC GCGAAATCGA CGCCGCCGAT
AACCTCGCCA CGCTGCTGCA GAGCCAGGTC GGCGGCACGT TGCGCATCAG CACCTCGGTG
GCGTTCGGGC GGCGGGTGGT GGTGCCGCTG GTGCTGCGCT ACATGCGCCT GCACCCGGAG
GTCACGGTCG ACCTGGCCTT CGACGACCGC TACGTGAATC TGGTCGAGCA GGGCGTGGAC
CTGGCGATCC GCATGGGCCG GCTGGCCGAT TCGGCGCTCG GCGCGCGCTA CCTCGGCACC
AACCCCTGGC TGATGGCGGC CGCGCCGGCC TATCTGCGCG AGCACCCGGC GCCGGCCACG
CCCGCCGATC TGGCCGCGCA CGCCTGCCTG GTCTACAGCA GCGTGCAGGG CGACGAACGC
TGGAGCCTGA CCACGCCGGC CGGCGAGGAG ACATCGGTGC CGGTGCGCGG GCCGCTGCGA
TCGAACAACC TGTCGGCCGT GCTGGCCGCG GCGCGCGCCG GCATGGGCCT GGCGGTGCTG
CCCTGGTACG TGGCGCGCGA GTCGGTGGCC GACGGTGCGA TCACCCCCGT GCTGGCCGAC
CACCTGCTGC CCGCGCAGGC GGTGCATGCG GTGTTCCCGT CGCCGCGGTT GGTGCCGCTG
AAGGTGACGA ACTTCATCGC CTTCCTGCAG CAGGCGCTGG CCGGCGAGTG GTGGCGGCAG
GCGCTGTAG
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| Protein sequence | MDRITGVQLF IRIVETASFS KAAAEFGITQ PTATKSVAAM EQRLGARLLH RSTRGVTPTE
VGALYYDKCK LIAREIDAAD NLATLLQSQV GGTLRISTSV AFGRRVVVPL VLRYMRLHPE
VTVDLAFDDR YVNLVEQGVD LAIRMGRLAD SALGARYLGT NPWLMAAAPA YLREHPAPAT
PADLAAHACL VYSSVQGDER WSLTTPAGEE TSVPVRGPLR SNNLSAVLAA ARAGMGLAVL
PWYVARESVA DGAITPVLAD HLLPAQAVHA VFPSPRLVPL KVTNFIAFLQ QALAGEWWRQ
AL
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