Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0259 |
Symbol | |
ID | 6160578 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 274065 |
End bp | 275648 |
Gene Length | 1584 bp |
Protein Length | 527 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641663003 |
Product | alkyl hydroperoxide reductase, F subunit |
Protein accession | YP_001789299 |
Protein GI | 171056950 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3634] Alkyl hydroperoxide reductase, large subunit |
TIGRFAM ID | [TIGR03140] alkyl hydroperoxide reductase, F subunit |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.00384538 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTGGACC AAGCCCTCAA GACCCAATTG AAGAGCTACC TCGAGCGCCT GCAACGGCCG ATCGAGCTGG TGGCGTCTCT CGACGACAGC GCCAAGAGCG CCGAACTGCG CGGCCTGCTG CAGGACATCG CCGGCCTGTC GCCCCAGGTG AGCCTGGTCG AGCGCGACGA CGGCCAGCGC ACGCCCTCGT TCACGATCGG TGCGGCCGGC GCCGACGAGG CCGCCCGCAT CCGCTTTGCC GGCATCCCGC TGGGCCACGA GTTCACCTCG CTGGTGCTGG CGCTGCTGCA GACCGGCGGC CACCCGCCCA AGGTCGAGGC CGGCGTGATC GAGCAGATCC GCGGCCTGGA CGCCGACCTC AGCTTCGAGG TCTACATGTC CCTGACCTGC CACAACTGCC CGGACGTGGT GCAGGCGCTC AACCTGATGG CGGTGCTCAA CCCCGGCGTC AAGGTGACGA CGATCGACGG CGCGCTGTTC CAGGACGAGA TCGCGCAGCG CCAGATCATG GCGGTGCCCA CCGTGTTCCT GAACGGCCAG GAGTTCGGCG CCGGCCGCAT GACGGTCGAA GACATCCTCG CCAAGGTCGA CACCGGCGCG GCCGCGCGTG ATGCGGCTCG GCTGGCCAAG CAGGCGGCCT ACGACATGCT GATCGTCGGC GGCGGCCCGG CCGGCGCGGC GGCGGCGGTG TACGCGGCGC GCAAGGGCAT CCGCACGGGC GTGGTGGCCG AGCGTTTCGG CGGCCAGACG CTCGACACGA TGGCGATCGA GAACTTCATC TCGGTCAAGG AAACCGACGG GCCGAAGTTC GCGGTGGCGC TGGAGCAGCA CGTCAAGCAG TACGACGTCG ACATCATGAA CGCGCAGCGC GCCGTCAAGC TGACCCCGGC CACCGAGCCG GGAGGGCTGG CCGAGCTGGA ACTGGCCAAC GGCGCGGTGC TGAAGGCGCG CAGCGTGATC CTGAGCACCG GCGCGCGCTG GCGCAACGTC AACGTGCCCG GCGAGGCCGA GTACAAGAAC AAGGGCGTGG CCTACTGCCC GCACTGCGAC GGCCCGCTGT TCAAGGGCAA GCGCGTGGCG GTGATCGGCG GCGGCAACTC GGGCGTCGAG GCGGCGATCG ACCTGGCCGG CATCGTCAAG CACGTGACGT TGATCGAATT CGCCGACGCG CTGCGCGCCG ACGCGGTGCT GGTGGCCAAG CTCAAGAGCC TGCCCAACGT GGCGATCCAC ACCAGCGCGC AGACCACCGA GATCCACGGC GACGGCCAGA AGGTCAACGG CCTGAGCTAC ACCGACCGTG TCAGCGGCGC GGGCCATCGG ATCGATCTCG AAGGCGTGTT CGTGCAGATC GGCCTGGTGC CCAACACCGA GTGGCTCAAG GGCACGATCG AGCTCAGCCG CCACGGCGAG ATCATCATCG ACGCCCGCGG CCAGACCAAT GTGCCCGGCA TCTACGCCGC CGGCGACGTG ACGACGGTGC CGTTCAAGCA GATCGTGATC GCGGTGGGCG AGGGCGCGAA GGCCGCACTC GGCGCCTTCG ACCACCTGAT GCGCACGCCG GTGGTGGCGG CCGAGACGGC CTGA
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Protein sequence | MLDQALKTQL KSYLERLQRP IELVASLDDS AKSAELRGLL QDIAGLSPQV SLVERDDGQR TPSFTIGAAG ADEAARIRFA GIPLGHEFTS LVLALLQTGG HPPKVEAGVI EQIRGLDADL SFEVYMSLTC HNCPDVVQAL NLMAVLNPGV KVTTIDGALF QDEIAQRQIM AVPTVFLNGQ EFGAGRMTVE DILAKVDTGA AARDAARLAK QAAYDMLIVG GGPAGAAAAV YAARKGIRTG VVAERFGGQT LDTMAIENFI SVKETDGPKF AVALEQHVKQ YDVDIMNAQR AVKLTPATEP GGLAELELAN GAVLKARSVI LSTGARWRNV NVPGEAEYKN KGVAYCPHCD GPLFKGKRVA VIGGGNSGVE AAIDLAGIVK HVTLIEFADA LRADAVLVAK LKSLPNVAIH TSAQTTEIHG DGQKVNGLSY TDRVSGAGHR IDLEGVFVQI GLVPNTEWLK GTIELSRHGE IIIDARGQTN VPGIYAAGDV TTVPFKQIVI AVGEGAKAAL GAFDHLMRTP VVAAETA
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