| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0243 |
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| Symbol | |
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| ID | 6160525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 261085 |
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| End bp | 262557 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641662987 |
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| Product | histidine kinase |
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| Protein accession | YP_001789283 |
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| Protein GI | 171056934 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3851] Signal transduction histidine kinase, glucose-6-phosphate specific |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.00127323 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGACAGCA GCAGCCCCGC ATCGCCCTTG CCGATCGCCC CGCACGGCAC AGCCACGACG
GCCGATCCGC CGCCGGTCGC GATCGCCGGG CGCAGCCTGC GCTTTCGCAT CCACCTGCTG
CTGGTCGGGC TGATGGGGCT GTTCATCGTG GCGCTGCTGG CGCAGCAGAT CGAGGCCACC
CGCACCAGCG TGCGCGAGGA GATCATTGCC GGCAACCGCG TCGCCGGCCA GCTGCTCGAA
CGGGTCGGCT GGGTCTACCG GCTGTCGGGG CCGGGCGCGC TGCTGGAGTT TCTCAACCAG
CTCGGCCGGG TGCGTGCCAA CGAGATCACG CTGCGCAGCG ACGCCGGGCA GGAGCTCTAC
CGCTCGCCGC CGCCGGTCTA CAAGCAGGGC CGCGCGGCGC CCGACTGGTT TGCGCACTGG
GTGGCGCCGC CGCCGCAGCG CCAGGTGATC CGCCTGCCGG GCGGGCAGCT GGTGGTCGAG
GCCGACCCGT CGCGCGCCAT CCTCGACGGC TGGGACGACC TGATGCGCAT GGCCACGCTG
GGCGGTGCGG CGCTGGTGCT GATCAACGTG CTGGTGTTCT GGTACGTGGG GCGCACGCTG
CGGCCGTTCA AGACCATCCT GGCCGGGCTG GTGCGGCTCG AACGCGGCGA CTACGCCGCC
CGCCTGCCGG CGCTGCCCGG GCGCGAGGCC GCATCGATCG GCAACGCCGT CAACCGCATG
GCCGCGGCGG TCGACGGCCA GCTGCAGGCC CGGCTGGCGG CCTACGAGGC GCAGCGAACC
CTGGCCGAGA GCCGCGAGAT CGCGCGCCAG ATCGAGCACC ACACCGAACA CGAGCGCCGC
GAGATGGCGC GCGAGCTGCA CGACGAGCTG GGCCAGTCGG TCACGGCAAT CCGCAGCGTC
GCCAACTCGC TGGTGCACCG GCTCGGCGAG CGCGACGCCG CCGGGCGCGA GATGGCGGCG
CTGATCTCCA GCGAGGCGGC GCGGCTCTAC GAGGTGATGC ACGGCCTGAT CCCGCGCCTG
ACGCCGCTGG CGCTCGACAG CCTGGGCCTG GCCGACGCGC TGGCCGATCT GGTGGGCGGC
GCACGCCAGC GCCCGGGCTC GCCGCAGATC GACCTGAACA CGCAGGCGCT GCCGGCCGGG
CTCGATGCCG AGCTGGCGCT GGCGGCCTAC CGCGTGGTGC AGGAGGCGCT CAACAACGCG
CTGCGCCACA GCGGCGCCGC TCGCATCGAC ATCGCCGCCA GCGCCGACGA CACCGGCCTG
CAGATCACGG TCGAGGACGA CGGCGCCGGC CTGCCGCCCG ACTGGCAGCG GCCCGGCCAC
TACGGCCTGC GCGGCCTGCG CGAGCGCCTG CGCGGGCTCG GCGGCGAGCT GCAGATCGAA
GGCCTGGCGG CGCCCCGCAG CGGCGTGCGC GTGAGCGCGT CGCTGCCGCT CGTCGGCCCC
CCCGCAACCC CAGCCGAAAG GCCCCGAACA TGA
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| Protein sequence | MDSSSPASPL PIAPHGTATT ADPPPVAIAG RSLRFRIHLL LVGLMGLFIV ALLAQQIEAT
RTSVREEIIA GNRVAGQLLE RVGWVYRLSG PGALLEFLNQ LGRVRANEIT LRSDAGQELY
RSPPPVYKQG RAAPDWFAHW VAPPPQRQVI RLPGGQLVVE ADPSRAILDG WDDLMRMATL
GGAALVLINV LVFWYVGRTL RPFKTILAGL VRLERGDYAA RLPALPGREA ASIGNAVNRM
AAAVDGQLQA RLAAYEAQRT LAESREIARQ IEHHTEHERR EMARELHDEL GQSVTAIRSV
ANSLVHRLGE RDAAGREMAA LISSEAARLY EVMHGLIPRL TPLALDSLGL ADALADLVGG
ARQRPGSPQI DLNTQALPAG LDAELALAAY RVVQEALNNA LRHSGAARID IAASADDTGL
QITVEDDGAG LPPDWQRPGH YGLRGLRERL RGLGGELQIE GLAAPRSGVR VSASLPLVGP
PATPAERPRT
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