| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0241 |
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| Symbol | |
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| ID | 6160523 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 259269 |
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| End bp | 260456 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641662985 |
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| Product | hypothetical protein |
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| Protein accession | YP_001789281 |
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| Protein GI | 171056932 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0004698 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAGCTCA CCGCCCTCGA GCGCCAGCTG GCGCCCTTCC TGGCCGTGCA GGCCTGCCTG
TCGACGCTGG TGGGCTTCGG CGCCGTGCTG GTCTACGCCG ACGCCGGCAT GGCCGCCACG
GTGCACTACA CGCTGCTGAT GCTGACCGTG ACGATGGCCG GCACGGTGCT GGCCTACACC
AGCGGCCGGC GCTGGCGCAT CGATGCCCGG CCGCTGGTGC GCGCGGCGTT CGGCGTGCCC
GGCCTGCTGC TGTGGTGGGC CGACGGGCAG CCGGTGGTGC TGGCCGTCGC CGTGGGCGGA
TTTCTCGGCC TGAGCTGGGG CGCACGGCTG TGGATCGAGC TCAGCGTGCT CGACGACACC
GGGCGCGACG GCTACGCCGC CCATGCCACC GTGCTGTCGG TGGTCGTCAG CCTGCTGACC
ACGCTGGTCG CCAGCCTGTG GTTGACGTTC TGGGGCGATG AACGCGGCGC GGCCAGCCTC
TACGGCCTGT ACGCCGGCGT GGCGCTGCTG GGCCTGGCGG TGGCACCACG GCACCTGCCC
GACACGCCGC CGCTGCGCCT GCACGCACCG CTGGCGGTGC TGCGCCAGCG CGAGTTCGTG
GCCTGCCTGC CGCTGTTCCT GCTGGAGTCG GGGCTGCTGG GCATCGGCAT GGTGATGAGC
GCCAGCGGCG CCATCGAGGC GCTCGGCAAG GCCAGCCACT ACGGCTGGGT CGCGACCGTC
GCCACGCTGG CCGGCGCGAT CGCGCTGTAC GCGCTGCGGC ACCGCCGCCA GGCCCACAAC
CGCGACGGCT GGATGGGCCT GGCCTGCCTG GGCATCACGG CGGCGCATGC GCTGCTCGGT
GCCAGCGCCT GGCTGCCGGC GCTGTACGTG CTGCACCTGC TGCTGCACGC CGTCACGCTG
CCGTTCTGGC TGGCCAGCGA ACAGGTGCTG AACCAGCGCA CGCTCGACAT CCACGGCGCG
CTGGCCGATC GCATCGTGGC GCGCGAGGCC ACGCTGTGGT TCTTCCGGGT GACGATGCTG
ACCGGCTTCT GGTTCGCCGC CCGGCAGGCC TCGCCGGCCT GGGTGCTGGC CACCGGCGCC
GGGCTGATGT GCGCAGCGGC GCTGCTCGAA TACGCGGTCG GCCGGGCTTG GCTGCGCCAC
GTGCCGGCCG GGCCGGCCGC CACGGCACCG AGTGCCGCCG ACGGCTGA
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| Protein sequence | MKLTALERQL APFLAVQACL STLVGFGAVL VYADAGMAAT VHYTLLMLTV TMAGTVLAYT
SGRRWRIDAR PLVRAAFGVP GLLLWWADGQ PVVLAVAVGG FLGLSWGARL WIELSVLDDT
GRDGYAAHAT VLSVVVSLLT TLVASLWLTF WGDERGAASL YGLYAGVALL GLAVAPRHLP
DTPPLRLHAP LAVLRQREFV ACLPLFLLES GLLGIGMVMS ASGAIEALGK ASHYGWVATV
ATLAGAIALY ALRHRRQAHN RDGWMGLACL GITAAHALLG ASAWLPALYV LHLLLHAVTL
PFWLASEQVL NQRTLDIHGA LADRIVAREA TLWFFRVTML TGFWFAARQA SPAWVLATGA
GLMCAAALLE YAVGRAWLRH VPAGPAATAP SAADG
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