| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0239 |
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| Symbol | |
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| ID | 6160521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 256769 |
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| End bp | 257434 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641662983 |
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| Product | YbaK/prolyl-tRNA synthetase associated region |
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| Protein accession | YP_001789279 |
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| Protein GI | 171056930 |
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| COG category | [R] General function prediction only
[S] Function unknown |
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| COG ID | [COG2606] Uncharacterized conserved protein
[COG3313] Predicted Fe-S protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.000372034 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTCGAACC CGAATCCCGA TCCCTCCGCC GTGCTGCCCG AACGGGTGCG CGAGGTCGCC
GCCTGGCTGG CCGAACGCGC GCATGCCGAT GCGCCGCGCT GGCTCGACGT CTCCGCCCGC
ACCGCGCAGG AGGCCGCCGA CGCACTGGGC GTGGCGCTCG GCCAGATCGC CAAGAGCGTG
ATCTTCCGGC GCCTGGCCGA CGACGTGGCG GTGCTGGTCG TGACCTCGGG CGACCGGCGG
GTCGACGAGG CCAAGGTGGT GGCGCAGGTC GGCGCGATCG GCCGTGCCGA CGCGGCTTTC
GTGCGCGCGC GCACCGGCTT CGTGATCGGC GGCGTGGCGC CGGTGGCGCA TCGCAACGAG
CCGGTGGTGC TGCTCGACCG CGACCTCTGG CGCTTCGAGT CGATCTGGGC CGCCGCCGGC
CATCCGAAGG CGGTCTTCCG GCTGGTGCCC GACGACCTGC GCCGGCTGTG CGCAGGCGCG
GCGGCGCACG ACGTCACCGA GTCGGCGGCG CCGCGCAGCC CGTGCATCGA CGTGTGCAAG
CTCGACCCCG TGACCCGCCT CTGCGAGGGC TGCCTGCGCA CCATCGACGA GATCGCCGGC
TGGTCGGCGA TGAGCGACGA GGCCCGCCTC GAGGTGCTGC GCCAGCTGCC CGGGCGCCGC
GCCTGA
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| Protein sequence | MSNPNPDPSA VLPERVREVA AWLAERAHAD APRWLDVSAR TAQEAADALG VALGQIAKSV
IFRRLADDVA VLVVTSGDRR VDEAKVVAQV GAIGRADAAF VRARTGFVIG GVAPVAHRNE
PVVLLDRDLW RFESIWAAAG HPKAVFRLVP DDLRRLCAGA AAHDVTESAA PRSPCIDVCK
LDPVTRLCEG CLRTIDEIAG WSAMSDEARL EVLRQLPGRR A
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