| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0227 |
|---|
| Symbol | |
|---|
| ID | 6162751 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | - |
|---|
| Start bp | 242079 |
|---|
| End bp | 242867 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641662971 |
|---|
| Product | biotin--acetyl-CoA-carboxylase ligase |
|---|
| Protein accession | YP_001789267 |
|---|
| Protein GI | 171056918 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0340] Biotin-(acetyl-CoA carboxylase) ligase |
|---|
| TIGRFAM ID | [TIGR00121] birA, biotin-[acetyl-CoA-carboxylase] ligase region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.00038256 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | TTGCCCTCCA CGATCCTCAA CTGGGATGCC GAAGACCTCT GGCTCGCGCT GGAGCCCCAT
GCCCCGGGCC TGAGCATCGA GGTGCTGCCC GAAACCGCAT CGACCAACAC CGCCCTGCTC
GAACGCGCCC GCGCCGGCGA CAGCGCGCCC TGCCTGCTGG TGGCCGAGCG CCAGAACGCC
GGTCGCGGCC GGCTCGGCCG CAGCTGGAGT TCCGCACCCG GGCGCTCGCT GACCTTCTCG
CTCGCCTGCC CGCTCGCACC GGCCGACTGG TCGGGCCTGT CGCTGGCGGT CGGGCTGGCG
CTGGCCGAGG CGCTGCATCC GCGCATCGGC ATCAAGTGGC CCAACGACCT GTGGCTGCGC
GGCGACGACC GCAAGCTCGG CGGCATCCTG ATCGAGACGC TGATGGCGCC CGGCAGCGCG
GACGGTGCAC GCCAGGTGGT GGTCGGTGTC GGCCTGAACA TCGAGCCGCT GGGCGACGCC
GAGACGGCCC CGTTCGGCAG CGGCTATGCG TGCCTGCAGG AGCTCGATCC GGCTGCCAGC
GCGCCGCTCG CGCTGCACCG CGTGGCGCTG CCGCTGTGGC GGGCGCTGCA GGATTTCGAG
CGTCACGGCC TGGCCCCGCT GTTGCCGCGT TTTGCCGCGC GTGACGTGCT GGCCGGCCGC
CCGGTGCAGG CCGGCGATCG GCACGGCACG GCCTGCGGCA TCGCGCCCGA CGGCGCCCTG
CTGCTGCGCG ACGCCGCCGG CCAGATCCAC GCCGTGCACA GCGGCGAAGT GAGCGCGCGC
CCATGCTGA
|
|---|
| Protein sequence | MPSTILNWDA EDLWLALEPH APGLSIEVLP ETASTNTALL ERARAGDSAP CLLVAERQNA
GRGRLGRSWS SAPGRSLTFS LACPLAPADW SGLSLAVGLA LAEALHPRIG IKWPNDLWLR
GDDRKLGGIL IETLMAPGSA DGARQVVVGV GLNIEPLGDA ETAPFGSGYA CLQELDPAAS
APLALHRVAL PLWRALQDFE RHGLAPLLPR FAARDVLAGR PVQAGDRHGT ACGIAPDGAL
LLRDAAGQIH AVHSGEVSAR PC
|
|---|
| |