Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0216 |
Symbol | glyQ |
ID | 6163480 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 228042 |
End bp | 228995 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641662960 |
Product | glycyl-tRNA synthetase subunit alpha |
Protein accession | YP_001789256 |
Protein GI | 171056907 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0752] Glycyl-tRNA synthetase, alpha subunit |
TIGRFAM ID | [TIGR00388] glycyl-tRNA synthetase, tetrameric type, alpha subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.0389393 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGACTT TCCAGCACAT CATCCTGCGC CTGCAAGACT ACTGGGACCG CCAGGGCTGC GCGCTGCTGC AACCCTACGA CATGGAGGTC GGCGCCGGCA CCAGCCACAC CGCGACCTTC CTGCGCGCCC TCGGCCCCGA GCCCTGGAAG GCCGCCTACG TGCAGCCGAG TCGCCGGCCC AAGGACGGCC GCTACGGCAA CAACCCGAAC CGCCTGCAGC ACTACTACCA GTACCAGGTG GTGCTCAAGC CCGCGCCGGC CAACATCCTC GACCTCTACC TCGGCTCGCT CGAGGCGCTC GGTTTCGATC TGAAGAAGAA CGACATCCGC TTCGTCGAGG ACGACTGGGA GAACCCGACG CTGGGCGCCT GGGGTCTCGG CTGGGAGGTC TGGCTCAACG GCATGGAAGT CACCCAGTTC ACCTACTTCC AGCAGGTCGG CGGCATCGAC TGCAAGCCAA TCACCGGCGA GATCACCTAC GGCCTGGAGC GGCTGGCGAT GTACCTGCAG GGCGTCGAGA ACGTCTACGA CCTGCAGTAC GCGCCGGGCC TGACCTACGG CGACGTGTTC CACCAGAACG AGGTCGAGCA GTCGACCTAC AACTTCGAGC ACAGCAACGT CGAGTTCCTG CTGAGCGCCT TCGGTGCGCA CGAGGGCAAC GCCCAGGAGC TGATGGCGCA GCAGCTCGCG CTGCCGGCCT ACGAGCAGGT GCTCAAGGCC GCGCACACCT TCAACCTGCT CGACGCCCGC GGCGCGATCA GCGTGACCGA ACGTGCCGCC TACATCGGCC GCATCCGCAA CCTGGCGCGC GCCGTCGCCG CCGCCTACCT CGACAGCCGG GCGCGACTCG GCTTCCCGAT GGCACCGCGT GCCTGGGCCG ACGAGATCGG CGCCAAGCTG GCCGCCGAAG CGGAAAAAGC AGCCCTCAAG AACGAAGCGA AGAAAGCGGC CTGA
|
Protein sequence | MLTFQHIILR LQDYWDRQGC ALLQPYDMEV GAGTSHTATF LRALGPEPWK AAYVQPSRRP KDGRYGNNPN RLQHYYQYQV VLKPAPANIL DLYLGSLEAL GFDLKKNDIR FVEDDWENPT LGAWGLGWEV WLNGMEVTQF TYFQQVGGID CKPITGEITY GLERLAMYLQ GVENVYDLQY APGLTYGDVF HQNEVEQSTY NFEHSNVEFL LSAFGAHEGN AQELMAQQLA LPAYEQVLKA AHTFNLLDAR GAISVTERAA YIGRIRNLAR AVAAAYLDSR ARLGFPMAPR AWADEIGAKL AAEAEKAALK NEAKKAA
|
| |