| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0214 |
|---|
| Symbol | |
|---|
| ID | 6161306 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | - |
|---|
| Start bp | 225285 |
|---|
| End bp | 225884 |
|---|
| Gene Length | 600 bp |
|---|
| Protein Length | 199 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641662958 |
|---|
| Product | histidinol-phosphate phosphatase family protein |
|---|
| Protein accession | YP_001789254 |
|---|
| Protein GI | 171056905 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0241] Histidinol phosphatase and related phosphatases |
|---|
| TIGRFAM ID | [TIGR00213] D,D-heptose 1,7-bisphosphate phosphatase
[TIGR01656] histidinol-phosphate phosphatase family domain
[TIGR01662] HAD-superfamily hydrolase, subfamily IIIA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.05751 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGAAC GCAACCCCCT GAAGATCGTG GTCGTCGACC GCGACGGCAC GCTCAACGAG
TTGCGCGACG ACCACGTCAA GACGCCCGAG GAATGGCAGC CCATCCCCGG CGCGCTCGAA
GCCATCGCGC GGCTGCACCA GGCCGGCTGG CATGTGGTGG TCGCCACCAA CCAGTCGGGC
CTGGGGCGCG GGCTGTTCGA CATGTCCACG CTCAACGCCA TCCACCAGAA GATGAACGAG
GAGCTGGCGC GCCTGGGCGG GCGCATCGAC GCGGTGTTCT TCTGCCCGCA CGCGCCCGAG
GACCATTGCA CCTGCCGCAA GCCGCTGCCC GGCCTGTTCG AGGACATCGC CGATCGCATG
GGCGTCGAGA CCCACGAGAT GCACGCGGTG GGCGACTCGC TGCGCGACAT GCAGGCCGCC
CGCAACGCCG GCTGCAAGAC CCACCTGGTG CTCAGCGGCC GCTCGGCCGG GATCGACGAG
GCCGGCCTGG CGCGCCTGCA TGAACTCGTC GGCGACGTCA CCGTGCACGC CGACCTGGCC
GCCTTTGCCG AAACCTTGAT TGCCGCCGAC CGCCGCAAGA GCCAGGACGC TCGCCGCTGA
|
|---|
| Protein sequence | MSERNPLKIV VVDRDGTLNE LRDDHVKTPE EWQPIPGALE AIARLHQAGW HVVVATNQSG
LGRGLFDMST LNAIHQKMNE ELARLGGRID AVFFCPHAPE DHCTCRKPLP GLFEDIADRM
GVETHEMHAV GDSLRDMQAA RNAGCKTHLV LSGRSAGIDE AGLARLHELV GDVTVHADLA
AFAETLIAAD RRKSQDARR
|
|---|
| |