Gene Lcho_0210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0210 
Symbol 
ID6161302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp220745 
End bp221488 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content75% 
IMG OID641662954 
ProductAsp/Glu/hydantoin racemase 
Protein accessionYP_001789250 
Protein GI171056901 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4126] Hydantoin racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.0948145 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTGC TGATCGTCAA CCCGAACACC TCGTCGGCCA TGACCGAGGG CATCGGCCGC 
GCCGCGCAGG CCGTGGCCGC GCCCGGCACC CGCATCGTCG CCACGCAGCC GAGCTTCGGG
CCGCTGTCGA TCGAGGGCCA TTTCGACGAG ACCATCGCCG CCGCCGGCGT GGCCGAGCAG
GTGCGCCTGC ATGCCGGCCC GGACGTGGTC GACGCGCCGT CGGGCATCGT CATCGCCTGC
TTCGGCGACC CCGGCCTCGA CGCCGCGCGC GAGGCCGCCA CCGCGCCGGT GCTGGGCATC
GCCGAGGCGG CCTTCCACGC CGCGAGCTTC CTGGCCACCG GCTTCTCGGT CGTCACCACG
ATGACGCGCA CCTGCGTGAT CGCCGAGCAC CTGGTGCAGA AGTACGGCTT CGAGCACCGC
TGCCGCGGCG TGCACGGCAC CGACATCCCG GTGCTGGCGC TCGAGGACGG CGGCGCCGGC
TGTGTCGACG CCATCGAGGC CGCCGCCCGC GAGGCGCTGG CGCGCGACCG CAGCGGCGCC
ATCGTGCTCG GCTGCGCCGG CATGGCCGCG CTGTGCGCCA CGCTGAGCGC GCGCCTGGGC
GTGCCGGTGA TCGACGGCGT CGCCGCGGCG GTCAAGTTTG CCGAGGCGCT GGCGGCGCTC
GGCCTGCAGA CCGGCAAGCA GGGCGACTAC GCCCGGCCGC TGCCGAAGGT CTACACCGGC
TGGGCGGCGC CGCTGGGCTG GTGA
 
Protein sequence
MKLLIVNPNT SSAMTEGIGR AAQAVAAPGT RIVATQPSFG PLSIEGHFDE TIAAAGVAEQ 
VRLHAGPDVV DAPSGIVIAC FGDPGLDAAR EAATAPVLGI AEAAFHAASF LATGFSVVTT
MTRTCVIAEH LVQKYGFEHR CRGVHGTDIP VLALEDGGAG CVDAIEAAAR EALARDRSGA
IVLGCAGMAA LCATLSARLG VPVIDGVAAA VKFAEALAAL GLQTGKQGDY ARPLPKVYTG
WAAPLGW