| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0187 |
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| Symbol | |
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| ID | 6161427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 196034 |
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| End bp | 196675 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641662931 |
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| Product | multiple antibiotic resistance (MarC)-related protein |
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| Protein accession | YP_001789227 |
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| Protein GI | 171056878 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2095] Multiple antibiotic transporter |
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| TIGRFAM ID | [TIGR00427] membrane protein, MarC family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCTGC TCAAACCGTT GATCGCCTTG CTTGCCATCG TCAACCCGAT CGGCGTGGTG
CCGTTTTTCA TCCACTTCAC GCGTCATCTG GACGATCGGC AGCGTCGCCA CACGATCCGC
GTGTCGAGCT TCACGGCGTT TGTCGTGATC TCGGTCAGCG CCCTGGCCGG CCTGCAGGTG
ATCGAATTCT TCGGGATCTC GCTCGCCTCC TTCCAGGTCG GTGGTGGCAC CCTGCTGCTG
ATCAGCGCGC TGCAGATGCT CAACGCCCAG CCGGCCGAGA CGCGCAAGGA GGACGTCAGC
GAGGGTGAAC AGAAAGCCGA TGCCGGAGCC AGCATCGCCG TGGTGCCGCT GACCATTCCG
CTGCTGACCG GCCCGGCGAC CATCTCGACG ATGGTCATCT ACGCCGACCA CGCTCGCCAC
TGGTGGCAGC TTGCCGCCCT GGTCGGCTAC GGGGTGGTGG TCGGGCTGGC GACCTTCATC
GCCTTTTCGG CTGCAGGGCG CATCGCGCGC CTGCTCGGAC AGACCGGCAT CAACGTGATG
ACGCGCCTGA TGGGGCTGAT CTTGGCCGCC CTGGCGGTGG AAATCATGGC CGAAGGGCTG
ACCAAGCTGT TTCCGGTGCT GGCCTCGCAC CTGGCTCGCT GA
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| Protein sequence | MDLLKPLIAL LAIVNPIGVV PFFIHFTRHL DDRQRRHTIR VSSFTAFVVI SVSALAGLQV
IEFFGISLAS FQVGGGTLLL ISALQMLNAQ PAETRKEDVS EGEQKADAGA SIAVVPLTIP
LLTGPATIST MVIYADHARH WWQLAALVGY GVVVGLATFI AFSAAGRIAR LLGQTGINVM
TRLMGLILAA LAVEIMAEGL TKLFPVLASH LAR
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