| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0185 |
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| Symbol | |
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| ID | 6161425 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 194353 |
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| End bp | 195156 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641662929 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001789225 |
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| Protein GI | 171056876 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGAGA CGCAATTGCC CATGCCGACC GATGCGCCCC TGGTTGTCAT CACCGGTGCC
TCCAGCGGCA TCGGCCAGGC GCTTGCCAGC GCCTATGCGC AGCGTGGCTG GCGCCTGGCC
CTGGTGGCAC GCCGCGCCGA GGTGATGCAG GCCTGGGTTC GTGAGCAGCA GCTCGATCCT
GCGCGTGTGG CGGTCTATGG TGCCGACGTC CAGGACATCG ACGCCATCGT CGACGCTGGC
CAGCGTTGCC TGCTCGAATG CGGGCTGCCC GACGTCGTGA TCGCCAACGC CGGCATCAGC
GTCGGCATCG ACACGGCCGA ACGTTCCGAT CTGGATGTGC TGCGCGAGAT CTACGCCACC
AACAACGTTG GCATGGCCGC CACCTTTCAC CCGTTCATCG CTGCGATGCG GCTCGCGCGG
CGTGGCACGC TGGTCGGGGT GGCGAGTGTC GGCGCCATCC GTGGCATGCC GGGTCACGGC
GGCTATTGCG CCAGCAAGGC GGCGGTGGCG AGCTATTGCG AAAGCCTGCG CCTGGAGTTG
CGCTCCGACG GCGTGCGTGT CGTGACCTTG CTGCCCGGCT TTGTCGACAC GCCGCTCACG
CGCCAGAACC CCTATCCGAT GCCGTTCATG ATGTCTGCCC CGGCATTCGC CGCAAGGGCG
ATCCGTGCGA TCGACGCGGC CGATCGCTGG CGCGTCATTC CGTGGCAGAT GGGCTGGGTC
GCCAAGCTCC TGCGGTGCCT GCCCGATGCG ATCTACGACC GGGCGATGGC CGGCCGTGCG
CGCAAGAAGC GGCGAAGTGA ATGA
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| Protein sequence | MPETQLPMPT DAPLVVITGA SSGIGQALAS AYAQRGWRLA LVARRAEVMQ AWVREQQLDP
ARVAVYGADV QDIDAIVDAG QRCLLECGLP DVVIANAGIS VGIDTAERSD LDVLREIYAT
NNVGMAATFH PFIAAMRLAR RGTLVGVASV GAIRGMPGHG GYCASKAAVA SYCESLRLEL
RSDGVRVVTL LPGFVDTPLT RQNPYPMPFM MSAPAFAARA IRAIDAADRW RVIPWQMGWV
AKLLRCLPDA IYDRAMAGRA RKKRRSE
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