Gene Lcho_0180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0180 
Symbol 
ID6161186 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp189530 
End bp189931 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content69% 
IMG OID641662924 
Producttranscriptional coactivator/pterin dehydratase 
Protein accessionYP_001789220 
Protein GI171056871 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2154] Pterin-4a-carbinolamine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCCA GCCCTGCCGT GCTGAGCGAG GAGCAGTTGC GCAGCCGGCT GCCGCTCGAG 
CTGCCGCACT GGTCGATCGA ACACGGCCGG CTGTTCCGCC GCTGGCGCAC CAGCGGCTGG
AAGAGCACGC TGATGGTGGT CAATGCCATC GGTCATCTCG CCGAGGCGGC CTGGCACCAC
CCCGATCTGT CGGTGTCGTA TGCGGCGGTC GACGTCAAGC TGAGCACCCA CTCGGCCGGC
GGCATCACCG AGAAGGATCT GGCGCTGGCC AGCAAGATCG AGCAGGTGAT CGGCTGGCAG
CCGGCGCTGG AGCCCGACTC TGTGCTCGAG GGCACGCCCA ACAGCGACCC GCGGCTGCGC
TACATCCGGT ACGACACGCC GGCGCCGGGT GGCACGGACT GA
 
Protein sequence
MNPSPAVLSE EQLRSRLPLE LPHWSIEHGR LFRRWRTSGW KSTLMVVNAI GHLAEAAWHH 
PDLSVSYAAV DVKLSTHSAG GITEKDLALA SKIEQVIGWQ PALEPDSVLE GTPNSDPRLR
YIRYDTPAPG GTD