Gene Lcho_0152 details

Gene Information

• Locus tag: Lcho_0152
• ID: 6163208
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Leptothrix cholodnii SP-6
• Kingdom: Bacteria
• Replicon accession: NC_010524
• Strand: +
• Start bp: 156940
• End bp: 157476
• Gene Length: 537 bp
• Protein Length: 178 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 641662896
• Product: transcriptional activator FlhC
• Protein accession: YP_001789192
• Protein GI: 171056843

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 43
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCGAGCCA AGAGCATCCT GACCGAAGCC AAGCAGATCG ATCGCGCCGT GACGCTGATC 
AAGCTCGGCG CCCGCCTGCA GGTGCTGGAG TCGGAGACCG ACCTGTCCTA CGAGCGCCTG 
CTGCGCCTGT ACAAGGAAGT CGCCGGCAAG TCGCCGAGCA AGGGTCAGCT GCCGTTCTCG 
ACCGACTGGT TCATGACCTG GCAGCCCAAC ATCCACGCCA GCCTGTTCCT GAACACGCAT 
GAGTACCTCA ACAAGGTCGC CGAGATGGAC GAGATCGACA CCGTCATCAA GGCCTACCAG 
CTCTACCTCG AGCAGACGCA ATCGCAGGGT CTCGAGCCCC TGTTGTCGGT GACCCGTGCC 
TGGCGGCTGG TCAAGTTCGT CGACAACGGC ATGCTCACGA TGACCGCCTG CTCCAAGTGC 
GGCGGCCACT TCGTGACCCA CCCGCACGAG ATCGCCAAGC ACTACGTGTG CGGCCTTTGC 
AACCCGCCGG CGCGGGCCGG CAAGGGCAAG GCCAGCGGCG GCCTGCAGCT GCACTGA 

 

Protein sequence

MRAKSILTEA KQIDRAVTLI KLGARLQVLE SETDLSYERL LRLYKEVAGK SPSKGQLPFS 
TDWFMTWQPN IHASLFLNTH EYLNKVAEMD EIDTVIKAYQ LYLEQTQSQG LEPLLSVTRA 
WRLVKFVDNG MLTMTACSKC GGHFVTHPHE IAKHYVCGLC NPPARAGKGK ASGGLQLH