| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0137 |
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| Symbol | |
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| ID | 6162938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 140669 |
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| End bp | 141541 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641662881 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001789177 |
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| Protein GI | 171056828 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.905648 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAGTG CTGCACCCCG TTTCATTCCG CGCCTGCTGA TGGCGCCTGC AGTGACCACG
CTCTTCCTCT GGATGATCGT GCCGCTGGTG ATGACGATCT ATTTCAGCGT CATCCGCTAC
AACCTCATGC AGCCCGAGAA CGTCGGCTTC ATCGGGCTCG AGAACTTCGA ATACTTCGTC
ACCGACCCGA GCTTCGGCAC GGCGGTGATG AACACCCTGC TGCTGCTGGG CAGCGTGATC
CTGATCACCG TGCTGATGGG CATCGCCATC GCGCTGCTGA TCGACGCGCC CTTCCCCGGC
CGCGGCCTGG TGCGCATCCT GCTGATCTCG CCGTTCTTCG TCATGCCCAC GGTCAATGCG
CTGCTGTGGA AGCACATGAT GATGAACCCG ATCTACGGCG TGCTGGCGCA GGTCTGGATC
TTCTTCGGCG CCACGCCGGT GGACTGGCTG ACCGACTGGC CGCTGCTGAG CGTGATCATC
ATGGTGGCCT GGCAATGGCT GCCGTTCGCC ACGCTGATCT TCATCACCGC GCTGCAGAGC
ATGGACCGCG AGCAGCTCGA AGCCGCGCGC ATGGACGGTG CCAACTACGG CCAGCAGCTG
CGCTACCTCT ACATCCCGCA CCTCGGCCGC TCGGTGGCGG TGGTGGTGAT GATCGAGATG
ATCTTCCTGC TCAGCGTCTT TGCCGAGATC TACACCACCA CCGGTGGCGG ACCGGGTGAC
GCGAGCACCA ACGTCGCCTT CCTGATCTTC AAGCAGGCGC TGCTGAACTT CGACGCCGGC
GTGGCTTCTG CCGGGGCGCT GTTCGCCGTG CTGCTGGCCA ACATCGCGGC GATCTTCCTG
ATCCGCCTGG TCGGCAAGAA CCTCGACAAG TGA
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| Protein sequence | MQSAAPRFIP RLLMAPAVTT LFLWMIVPLV MTIYFSVIRY NLMQPENVGF IGLENFEYFV
TDPSFGTAVM NTLLLLGSVI LITVLMGIAI ALLIDAPFPG RGLVRILLIS PFFVMPTVNA
LLWKHMMMNP IYGVLAQVWI FFGATPVDWL TDWPLLSVII MVAWQWLPFA TLIFITALQS
MDREQLEAAR MDGANYGQQL RYLYIPHLGR SVAVVVMIEM IFLLSVFAEI YTTTGGGPGD
ASTNVAFLIF KQALLNFDAG VASAGALFAV LLANIAAIFL IRLVGKNLDK
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