| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0133 |
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| Symbol | |
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| ID | 6161261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 136350 |
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| End bp | 137297 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641662877 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001789173 |
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| Protein GI | 171056824 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.13686 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCCA AGCCAGCCAG ACCCCGCGCC GTGCCGCGCC AGCTCAAGCC CGAGCTGGAG
CACGACTACG CCCGCTCGCC CGACCTGGGC TACGAGTCGC CCGGCGACGT CGGGCTGATC
CGCTGCCTGG AGCATGGTTT CCCGACGCCG CTGGCGCGCT GGCATTACCA CGACGAGTAC
GAGCTGCACC TCATCACCAG CACCTCGGGC AAGGTGTTCG TGGGCGACTG GATCGGCCAG
TTCCAGCCCG GCCAGCTGGT GCTCACCGGC CCGCGCCTGC CGCACAACTG GGTCTCGATG
GACGTGCCCG AAGGCGGCGT GCCGCTGCGG GACCTGGTGA TCCAGTTCCC GCACGAGCCG
CTGGTGCGCG CCGCCGAGAC CATCCCCGAG CTGGCCGAGC TGCTGCCGCT GCTGGAGCGG
GCGCGGCACG GCATCGAGTT CTTCGGCATC TCCGACCGCG CACAGGCCCA CTGGCAGCGC
GTCAAGGCGA GCCGCGGCCT GCGCCGTTTC ACCGAGTTCT GCACCTTCCT GTGCGACCTG
TCGGCCTGCA CCGACTACCG GCTGCTGTCG AACGTGCAGC TGCAGAGCGT CGACGACGAC
CACTCGCTCG ACCAGATCGA CGCGGTCGTG ATGCGCCTGA CCGACAACCT CGCGCAGCCG
ATCTCGGCCG CCGACGTGGC CGCCGAACTG GGCATGAGCG AGAGCCGCTT TTCCCGCTTC
TTCCGCCGCG CCACCGGCAA CACCTTCACC GACTTCGTCA ACCGCGTGCG CATCAACCGC
GCCTGCCAGC TGCTGATGGA AAGCGACCGG CTGATCACGC ACATCTGCTA CGAGGTCGGC
TTCAACAACG TCGCCAATTT CAACCGCCGC TTCCTCGAGA TCAAGGGCAT GACACCGAGC
GAGTTCCGCA AGCAGGCGGA CAACCGCTTC AGCGGCTCGT CGGTCTGA
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| Protein sequence | MPAKPARPRA VPRQLKPELE HDYARSPDLG YESPGDVGLI RCLEHGFPTP LARWHYHDEY
ELHLITSTSG KVFVGDWIGQ FQPGQLVLTG PRLPHNWVSM DVPEGGVPLR DLVIQFPHEP
LVRAAETIPE LAELLPLLER ARHGIEFFGI SDRAQAHWQR VKASRGLRRF TEFCTFLCDL
SACTDYRLLS NVQLQSVDDD HSLDQIDAVV MRLTDNLAQP ISAADVAAEL GMSESRFSRF
FRRATGNTFT DFVNRVRINR ACQLLMESDR LITHICYEVG FNNVANFNRR FLEIKGMTPS
EFRKQADNRF SGSSV
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