| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0109 |
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| Symbol | |
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| ID | 6162185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 112164 |
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| End bp | 113549 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641662853 |
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| Product | histidine kinase |
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| Protein accession | YP_001789149 |
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| Protein GI | 171056800 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.000786251 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGTTGGC TCAAACTCAT GCGCGGCGAT GCGAGCGGTG GTTTTCCGCT GGTTCGCTGG
TTCTCGCTCG TGAGTCTGCT GGCGGTCGGG GTGGTCAGCA TCACGATGGC GCTGGTGCTG
GCGCGGTTCC TCGAAACCCG GCTGCTCGAT CACGACGCCA GCCTGAGCCG CGATTTCGTG
CAGAACATCG TCGACACCCA GAACGTCAGC AAGGGCTTCC TGATCGGCGG CGAAACGGTG
CGCGAGGCCG ACTTCGCCGA GTTCTTCACC CACGTCGCGG CGCTGCCCGA CGTGCTGCGC
GCCAATGTCT ACAGCCTCGA CAGGCGCGTG CTGTGGTCGA GCAACGCGGC GCTGATCGGT
CGCTACTTCG GCCGCAACGA CGAGCTCGAG GCGGCCCTCA AGGGCACGCT GGTGTGGGAG
CGCGGCGAGG TCGAGGACCA CACCGCCGTG GCCAAGGGCG AACACGTGGC GCTGGGCACG
CGGCGCGCGA GCTTCGTCGA GAACTACCTG CCGGTCTACA GCTCCGCCGG CACCAACCGC
ACCCTGATCG GCGTGGTCGA GCTGTACCGG GTGCCGCGCA CGCTCAACGA CACCCTGCGC
CAGGGCACGC TGCTGGTGTG GGTGTGTTCG CTGCTGGGCG GCGCGGTGCT GTATCTGTCG
ACCCTCGGAC TGGTGCGCAA GGCCAGCCGC CTGATGCACG AGCAGCGCCG CCGGCTGGTC
GAGGCCGACG CCCTGGCGCT GGTGGGCGAG ATCGCCGCGG CCACCGCTCA CAGCATCCGC
AACCCGCTGG CGTCGATCCG CTCGACCGCC GAACTGCAGC GCGAGATCGG CGACATGTCG
CCCGAGATGG CCAACGAGAC CATCCTGCAC GTCGACCGCA TCGAGCGGCT GGTGCGCACC
CTGCTCACCT ACAGCCGCGA CGCCGTCGAG GTGCTCGGCG ACACCGAGCT CGACCACGTG
CTGCGCGCCA CCGCCGAACA GTTCCGCCCG GCCTTCGACA GCCAGAACAA GCACCTCGTG
CTCGACTGGG CCGGCCCGCT GCCGGCGGTG CGCGGCGACC CGGTGCTGCT GCAGCAGGTG
CTCAACTCGC TGCTGTCGAA CGCGCTCGAG GCCTCCGGCC CGCAGGCCAC CGTCACCGTC
AAGGCGCAGG CCGACCAGGA CTCGGTGCGC GTCGAGGTTC ACGACCACGG CGACGGCATC
CCCGCCGAAC ACCTGGCCAA CGTGTTCCGA CCGTTCTACA CCACCAAGCC CCGCGGGCTG
GGCATGGGCC TGGCGCTGGT CAAGCGGGTG CTCGACCGCC TGGGGGGTGC CGTCGAGATC
AAGAGCGCAC CAGGTCAAGG CACCTCGGTG ATCCTGCAAC TGCCGCTGGC CCGCACGCCA
GCATGA
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| Protein sequence | MRWLKLMRGD ASGGFPLVRW FSLVSLLAVG VVSITMALVL ARFLETRLLD HDASLSRDFV
QNIVDTQNVS KGFLIGGETV READFAEFFT HVAALPDVLR ANVYSLDRRV LWSSNAALIG
RYFGRNDELE AALKGTLVWE RGEVEDHTAV AKGEHVALGT RRASFVENYL PVYSSAGTNR
TLIGVVELYR VPRTLNDTLR QGTLLVWVCS LLGGAVLYLS TLGLVRKASR LMHEQRRRLV
EADALALVGE IAAATAHSIR NPLASIRSTA ELQREIGDMS PEMANETILH VDRIERLVRT
LLTYSRDAVE VLGDTELDHV LRATAEQFRP AFDSQNKHLV LDWAGPLPAV RGDPVLLQQV
LNSLLSNALE ASGPQATVTV KAQADQDSVR VEVHDHGDGI PAEHLANVFR PFYTTKPRGL
GMGLALVKRV LDRLGGAVEI KSAPGQGTSV ILQLPLARTP A
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