| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0107 |
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| Symbol | |
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| ID | 6162183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 109970 |
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| End bp | 110695 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641662851 |
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| Product | glutathione S-transferase domain-containing protein |
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| Protein accession | YP_001789147 |
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| Protein GI | 171056798 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0625] Glutathione S-transferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.000372034 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCTGCAGC TCTACATCGG CAACAAGAAC TACTCGTCGT GGTCGATGCG CCCCTGGGTG
CTGATGACCG ACGCGGCCAT CCCGTTCACC GAGGTGAAGG TGCGCTTCGA CGCCTTCACG
CCCGGCTCGA CGTTCAAGCG CACGATGGGC GCGCTGGTGC CCACCGGCAA GGTGCCGGCG
CTGGTGATCG ACGACGGCGT GGATGACGGC GTCGCCGGCA GCAGCGGTCC GCAGGTGGTG
TGGGACACCC TGGCGATCGC CGAGACGCTG GCCGAGCGCC ACCCGGATCG CCAGCTCTGG
CCGGCCGATG CCGCACGACG CGCGCTGGCA CGCAGCCTGT GCGCCGAGAT GCACAGCGGC
TTCGGCGCGC TGCGCAACGC CTGCCCGATG AACATCGAGG CACGGCTGCC CGAGATCGGC
GCGCGCGTGC TGGCCGAGCA GCCGGCGGTG CAGGCCGACC TGGCGCGCAT CGTCGCGATG
TGGACCGGCT GCCTCGAACG CTTCGGCGGC CCGTGGCTGT TCGGCGAGCG TTTCGGCATC
GCCGACGCCT ATTACGCGCC GGTGGCCAGC CGGCTGCGCA GCTACGCGCT GCCGGTGCCC
GCGCCGGTGG CCGACTACAT CGAGCACATC CACCAGCGCC CGAGCGTGGC GGCCTGGGTG
GCCGATGCGC TGGCCGAACA CGACTTCCTC GACTTCGAGG AACCCTACCG CACGAGCCGC
GGCTGA
|
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| Protein sequence | MLQLYIGNKN YSSWSMRPWV LMTDAAIPFT EVKVRFDAFT PGSTFKRTMG ALVPTGKVPA
LVIDDGVDDG VAGSSGPQVV WDTLAIAETL AERHPDRQLW PADAARRALA RSLCAEMHSG
FGALRNACPM NIEARLPEIG ARVLAEQPAV QADLARIVAM WTGCLERFGG PWLFGERFGI
ADAYYAPVAS RLRSYALPVP APVADYIEHI HQRPSVAAWV ADALAEHDFL DFEEPYRTSR
G
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