| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0104 |
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| Symbol | |
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| ID | 6163519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 107261 |
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| End bp | 108475 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641662848 |
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| Product | hypothetical protein |
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| Protein accession | YP_001789144 |
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| Protein GI | 171056795 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1565] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.000103575 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGAATCGTC CACAGCCTCC AGCCACGACC GACAGTGTAG CCAGCGCCCC CGATGCGCAG
GCGCAGTCGG ACATCCCCCA CCGTTCGCCC CATGAGGCCA GCCCGGACAG CCACGCGCTG
CTCGTGCGCA TCGCCGCGGC GATCGAGGAC GCGGGCGGCT GGATCAGCTT CGAGCGCTAC
ATGGCGCTGG CGCTCTACAC GCCCGGGCTC GGTTATTACA GCCGCGGCGA CCGCCAGTTC
GGCCTGATGC CGGCCAGCGG CAGCGACTTC GTCACCGCAC CCGAGCTGTC ACCGCTGTTC
GGCCGCGCGC TGGCGCGCCA GGTGGCGCAG GCGCTGCAGG CCACCGGCAC GCAGGAAGTC
TGGGAGTTCG GCGCCGGCTC GGGCGCACTG GCCGCGCAGC TGCTGGGCGA GCTGGGCGAT
CGCATCACGC GCTACACCAT CGTCGACCTG TCGGGCACGC TGCGCGCACG CCAGCGCGAG
CGCATCGAGG CGGCCCATCC GGCGCTGGCG CACAAGGTGC GCTGGCTCGC AGAACTGCCC
GAGCGCTTCG AGGGCGTGGT GGTGGCCAAC GAGCTGCTCG ACGCCATGCC GGTCACGCTG
CTGCACTGGG ACGGCCACCA TTGGCACGAC CGCGGCGTGG CGCTCGAACC CGGCTCGGCG
GCCGCCGGTG CGCCGCGGCT GCGTTTTGCC GATCACCCGA CCCATCTGGC GCCGCCGGTC
GACCAGCACT GGCCGGTGGG CGCGGTGGTC GAGCTGCCGC GCATCGCGGT GGCCTACATC
CTGACGCTGG CCGAGCGGCT GGCGCGCGGC GCGGCGTTCT TCATCGACTA CGGTTTTCCC
GAGCACGAGT TCTATCACCC GCAACGCAGC GCCGGCACGC TGATGTGCCA TCGCGCGCAC
CGCGCCGACC CCGACCCGCT GTCCGACCCG GGCGACAAGG ACATCACCGC GCACGTCGAC
TTCACCGCCA TCGCGGTGGC GGCGCAGGAT GCCGGCATGG GCGTGCTGGG CTACACCAGC
CAGGCGCGTT TCCTGATGAA CTGCGGCCTG ATCGGCGACC TCGAACACGC CGACCTGCGC
GAGCGGGCGA TGGCGCAGAA GCTCATCACC GAACACGAGA TGGGCGAGCT GTTCAAGGTG
CTGGGCGTGG CCAGTGCCGG CGCCGAGTTC GACGCCATCG GCTTCACGGC CGGCGACCGC
AGCCACACGC TCTGA
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| Protein sequence | MNRPQPPATT DSVASAPDAQ AQSDIPHRSP HEASPDSHAL LVRIAAAIED AGGWISFERY
MALALYTPGL GYYSRGDRQF GLMPASGSDF VTAPELSPLF GRALARQVAQ ALQATGTQEV
WEFGAGSGAL AAQLLGELGD RITRYTIVDL SGTLRARQRE RIEAAHPALA HKVRWLAELP
ERFEGVVVAN ELLDAMPVTL LHWDGHHWHD RGVALEPGSA AAGAPRLRFA DHPTHLAPPV
DQHWPVGAVV ELPRIAVAYI LTLAERLARG AAFFIDYGFP EHEFYHPQRS AGTLMCHRAH
RADPDPLSDP GDKDITAHVD FTAIAVAAQD AGMGVLGYTS QARFLMNCGL IGDLEHADLR
ERAMAQKLIT EHEMGELFKV LGVASAGAEF DAIGFTAGDR SHTL
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