| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0098 |
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| Symbol | |
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| ID | 6161766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 101859 |
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| End bp | 103268 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641662842 |
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| Product | UDP-N-acetylglucosamine pyrophosphorylase |
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| Protein accession | YP_001789138 |
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| Protein GI | 171056789 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1207] N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) |
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| TIGRFAM ID | [TIGR01173] UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.00133426 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGGCTTG ATGTCGTGAT CATGGCTGCC GGCAAGGGCA CACGGATGAA ATCGGCCCGA
CCCAAGGTGC TGCACCCGCT GGCGGGGCGA GCCTTATTGC AGCATGTCCT GGAAATGGGC
GCCGGGCTGG GGGCGGATCG CCTCATCACC ATCACCGGCC ACGGCGCCGA GTCGGTCGAA
GCCGCCATGC GCGCCGCGCT GCCGGCCGCG CCGCTGGCCT TCGTGCGCCA GGAGCCGCAG
CTCGGCACCG GCCACGCCGT GCAGCAGGCG GTGCCCGCAT TGGGTGACGA GGGCACCACG
CTGATCCTCA ACGGCGACGT GCCGCTGGTG CGCCCCGAGA CCGCTCGCGC GCTGATCGCC
GCCTGCGGGG GCGAGAAGCT GGCACTGCTG ACCGTCGAAC TGGCCGACCC GACCGGCTAC
GGCCGCATCG TGCGTGACGC CGCCGACCGC GAGCGCGTGC TCGCCATCGT CGAGCACAAG
GACGCCACGC CCGAGCAGCG CGCCATCACC GAGGGCTACA CCGGCATGAT GGCCGTGCCG
ACCCGCCACC TCAAGCGCTG GCTGGCCGCG CTGCGCAACG ACAACGCGCA GAAGGAGTAC
TACCTGACCG ACATCGTCGC GATGGCCGAG GCCGACGGCG TGCCGGTGGT CGCCACGCTG
GCGGGCAACG AGACCGAGGT GCTGGGCGTC AACAGCCCGC TGCAGCTGGC CGAACTCGAG
CGGCGCTTCC AGCGCGTGCA GGCCGAATCG CTGATGGAAG CCGGCGTGCG CCTGATGGAC
CCGGCGCGCT TCGACCTGCG CGGCGTGCTG CGCTGCGGCC GCGACGTCGC GATCGACGTC
AACTGCGTCT TCGAGGGCGA GGTCGAGCTC GGCGACGAGG TGCAGATCGG CGCCAACTGC
GTGATCCGCA ACGCCCGCAT CGCCGCCGGC GCGGTGATCC ACCCCTTCAC CCACATCGAC
GGCGAAGCCG CCGGCGTCGA GGTCGGCGAG GGCGCGCTGA TCGGCCCGTT CGCGCGCCTG
CGCCCGGGCG CCAGGCTGGG CCGTGCAGTC CACATCGGCA ACTTCGTCGA GGTCAAGAAC
TCCACGCTGG CCGACGGCGC CAAGGCCAAT CACCTGGCCT ACCTGGGCGA CGCCACGGTG
GGTGAACGTG TCAACTACGG CGCCGGCAGC ATCACCGCCA ACTACGACGG CGCCAACAAG
CACCGCACCG TGATCGAGGC CGACGTGCAC ATCGGCAGCA ACTGCGTGCT GGTGGCGCCG
GTGACGATCG GCGCCGGTGC CACGGTGGGC GGCGGCTCGA CCATCACCAA GGACGTGGCG
CCCGGCCAGC TCGGCGTGGC GCGTGGCAAG CAGGTGGTGC TCGACGGCTG GGTGCGCCCG
AGCAAGAACA AGCCCGCCAA GCCGGCCTGA
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| Protein sequence | MRLDVVIMAA GKGTRMKSAR PKVLHPLAGR ALLQHVLEMG AGLGADRLIT ITGHGAESVE
AAMRAALPAA PLAFVRQEPQ LGTGHAVQQA VPALGDEGTT LILNGDVPLV RPETARALIA
ACGGEKLALL TVELADPTGY GRIVRDAADR ERVLAIVEHK DATPEQRAIT EGYTGMMAVP
TRHLKRWLAA LRNDNAQKEY YLTDIVAMAE ADGVPVVATL AGNETEVLGV NSPLQLAELE
RRFQRVQAES LMEAGVRLMD PARFDLRGVL RCGRDVAIDV NCVFEGEVEL GDEVQIGANC
VIRNARIAAG AVIHPFTHID GEAAGVEVGE GALIGPFARL RPGARLGRAV HIGNFVEVKN
STLADGAKAN HLAYLGDATV GERVNYGAGS ITANYDGANK HRTVIEADVH IGSNCVLVAP
VTIGAGATVG GGSTITKDVA PGQLGVARGK QVVLDGWVRP SKNKPAKPA
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