| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0089 |
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| Symbol | |
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| ID | 6161015 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 92887 |
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| End bp | 94695 |
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| Gene Length | 1809 bp |
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| Protein Length | 602 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641662833 |
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| Product | putative potassium transport flavoprotein |
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| Protein accession | YP_001789129 |
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| Protein GI | 171056780 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2072] Predicted flavoprotein involved in K+ transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.00322224 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGCAGA TTTCCCCCCC GATTTCTCCC ACGCAAAGGG CGGCCGACTG GCTGGCCCGC
TTCGAGGCCG CCGCCGCTGC ACGCGATGCC GACGCCGCCA CCGCGCTGTT CGACGACGAG
TGCTATTGGC GCGACCTTGT CAGCTTCACC TGGAACATCC GCACCTTCGA GAGCCGGGAC
GACATCCGCG CGATGTTGGC CGCGCGCCTG AATGATGTGC AGCCGTCGGC CTTCAAGGTC
GAGGGCGACG CCACCGAAGC CGGCGGCGTG ACCGAAGCGT GGTTCACCTT CGAGACCGCG
GTGTCGCGTG GGCGCGGCCT GCTGCGGCTG AAGGGCGATC GCGCGTGGAC CTTTCTGACC
ACGATGGTCG AGCTCAAGGG CCATGAAGAA AAGAAGGGCC CGCGCCGCAT CAAGGGTGCC
GAACACGGCG TGCAGCGCGG CCGCCAGACC TGGCTCGAAA AGCGCCAGCA CGAGCAGGCC
ACGCTCGGCT ACAGCGAGCA GCCCAACACG CTGATCATCG GCGGCGGGCA GGGCGGCATC
GGCCTGGCGG CGCGGCTGCG GCGTCTGGGC GTGCCGACCA TCGTGATCGA GAAGAATCCG
CGGGCCGGCG ACAGCTGGCG CAACCGCTAC AAGAGCCTCT GCCTGCACGA CCCGGTCTGG
TACGACCACA TGCCCTATCT GCCGTTCCCG GACGACTGGC CGGTGTTCTG CCCGAAGGAC
AAGGTCGGCG ACTGGCTGGA GTCGTACACC AAGATCATGG AGCTGAACTA CTGGGCCAGC
ACCGTGGCCG AGAAGGCGCG CTGGGACGAA GACAAGCAGG AGTGGGAAGT GCGCGTGGTG
CGCGAGGGCC AGCCGGTCAC GCTGCGGCCC AAGCAGCTGG TGTTCGCGCT GGGCGTGTCG
GGCTACCCGA ACGTGCCCAA GATCACCGGC GCGGAAACCT TCGAGGGCAC GCAACACCAT
TCGAGCAAGC ATCCCGGTGG CGCGGCTTGG GCGGGCAAGA AGTGTGTGGT GCTGGGCTCC
AACAACTCGG CCCACGACAT CTGCGCCGAC CTGTGGGAAA ACGGCGCCGA CGTGACGATG
CTGCAGCGCT CGTCGACGCA CATCGCGCCG TCGGATTCGC TGATGGAGCT GGCACTCGGC
GGGCTCTATT CCGAGGCGGC GGTGGCGGGT GGCATCAGCG CCGACAAGGC TGATCTGATC
TTCGCGTCGG TGCCGTACAA GATCATGCAC ACCTTCCACA TCCCCGTGTA CGAGGAGATG
AAGAAGCGTG ACGCCGACCT GTACGCGCGG CTCGAGAAGG CCGGCTTCAT GCTCGACTTC
GGCGAAGACG GCTCGGGCCT GTTCATGAAG TACCTGCGCC GCGGCTCGGG CTATTACATC
GACGTCGGCG CCAGCGAGCT GATCGCCAAC GGCAGCGTCA AGCTCAGGAG CCCGGTCAAC
ATCGAGCGCA TCAATCCGAA GTCGGTGACG CTGACCGACG GCAGCGAGCT GCCGTGCGAC
CTGCTGGTCT ACGCCACCGG CTACGGCTCG ATGAACGGCT GGCTGGCGGA CCTGATCTCG
CCCGAGGTGG CCGACCAGGT CGGCAAGTGC TGGGGCCTGG GTTCGGCCAC CACCAAGGAT
CCCGGCCCGT GGGAAGGCGA GCTGCGCAAC ATGTGGAAGC CCACGCCGGT CCAGAACCTG
TGGATCCACG GCGGCAACCT GCACCAGTCG CGCCATTACT CGCAGTTCTT GTCGCTGCAG
TTGAAGGCGC GCATGGAGGG CATCGCCACG CCGGTCTACC GGCCGCAGCC GGCGCACCAC
CGGCGCTGA
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| Protein sequence | MTQISPPISP TQRAADWLAR FEAAAAARDA DAATALFDDE CYWRDLVSFT WNIRTFESRD
DIRAMLAARL NDVQPSAFKV EGDATEAGGV TEAWFTFETA VSRGRGLLRL KGDRAWTFLT
TMVELKGHEE KKGPRRIKGA EHGVQRGRQT WLEKRQHEQA TLGYSEQPNT LIIGGGQGGI
GLAARLRRLG VPTIVIEKNP RAGDSWRNRY KSLCLHDPVW YDHMPYLPFP DDWPVFCPKD
KVGDWLESYT KIMELNYWAS TVAEKARWDE DKQEWEVRVV REGQPVTLRP KQLVFALGVS
GYPNVPKITG AETFEGTQHH SSKHPGGAAW AGKKCVVLGS NNSAHDICAD LWENGADVTM
LQRSSTHIAP SDSLMELALG GLYSEAAVAG GISADKADLI FASVPYKIMH TFHIPVYEEM
KKRDADLYAR LEKAGFMLDF GEDGSGLFMK YLRRGSGYYI DVGASELIAN GSVKLRSPVN
IERINPKSVT LTDGSELPCD LLVYATGYGS MNGWLADLIS PEVADQVGKC WGLGSATTKD
PGPWEGELRN MWKPTPVQNL WIHGGNLHQS RHYSQFLSLQ LKARMEGIAT PVYRPQPAHH
RR
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