| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0085 |
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| Symbol | |
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| ID | 6160351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 87210 |
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| End bp | 88604 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641662829 |
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| Product | serine/threonine protein kinase |
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| Protein accession | YP_001789125 |
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| Protein GI | 171056776 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4886] Leucine-rich repeat (LRR) protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.00708032 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCACAGCC TCGAACAACT GCGCTCGGGC GCCCTGGCCG GCACGCGCCG GCTCGACCTC
AGCGCCGGCC TGAGCCACTT TCCGCCCGAG ATCTACACGC TGGCCGACAC GCTGGAGGTG
CTCAACCTGT CGGGCAACCA GCTCAACGCC CTGCCCGACG ACCTGCCGCG GCTGCACCGG
CTGAAGGTCA TCTTCTGCTC CGACAACGCC TTCACCACGC TGCCCGCGGT GCTGGGCCGC
TGCGCGCAGC TGGAGATGGT CGGCTTCAAG GCCAACCGCA TCGCCGACGT GCCGGCCGAG
TCGCTGCCGG CGCAGCTGCG CTGGCTGATC CTGACCGACA ACGCGATCAC GCAACTGCCC
GCCACGCTGG GCTGGCGGCC GCGGTTGCAG AAACTGATGC TGGCCGGCAA CCGGCTGCGT
GACTTGCCCG ACCTGTCGCG CTGCACGCAG CTCGAGCTGC TGCGGCTGGC GGCCAACCGC
TTCGAGACGC TGCCCGCCTG GCTGCTCGAC CTGCCGCGGC TGAGCTGGCT GGCGCTGGCG
GGCAACCCGC TGCGTGCGCC GTTCGGCGCG CGGCCGCAAC AGCCTCTGCG GCCCGACCGG
CCGGACATCG CCCGCATCGC CTGGTCGCAG CTGCAGCTCG AACACGCCCT CGGCGAAGGG
GCCTCGGGCG TGATCCACCG CGCGCTGTGG CAGCCGCCCG ATCAGCACGC ACCGCAGGAT
GGTCGCGAAC CGCCGGCGCG GCAACACTCC CCCGCCCGGC CGGTGGCGGT CAAGCTGTTC
AAGGCGGCGA TGACCAGCGA CGGCCTGCCC GACTGCGAGA TGGCGGCCTG CATCGCGGCG
GCCGGGCATC CGGGGCTGAT CGCCGTCGAA GGCGTGCTGC ATGCGCACCC TGAGGGCAGC
GCCGGGCTGG TGCTGGCGCT GCTCGATCCG GCGTACCGGG CGCTGGCCGG CCCGCCCAGC
CTGGCCTCGT GCAGCCGCGA CGTCTACGCC GACACGCTGC GCCTGCCGGT GGCCGCCGCA
CTGGCGATCG CCCGCCGCAT CGCCGACGTG GCCGCGCACC TGCACGCCCA GGGCCTGATG
CACGGCGACC TGTACGCCCA CAACATCCTC TGGAACGGCG AAACGCAGCA GCCGCAATGC
GTGCTGAGCG ACTTCGGCGC CGCGTCCTTC CACGACCCGG CCAGCCCGGC CGCCGAGGCT
TTGCAGCGCC TCGAAGTGCG CGCCTTCGGC TGTCTGCTCG AAGAGCTGAT CGAGCGCGCC
GATGCAGCGC ACGCGGCCGA AACCGACGCG CTCGCCGCGA TGGCCGCGCT GCGCGACGCC
TGCCTGCAGC CGCAGGTGCA CGCGCGGCCG AGCTTGGCGC AGGTGGTCGG ACAACTGGCA
CAGATCGGCC ACTGA
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| Protein sequence | MHSLEQLRSG ALAGTRRLDL SAGLSHFPPE IYTLADTLEV LNLSGNQLNA LPDDLPRLHR
LKVIFCSDNA FTTLPAVLGR CAQLEMVGFK ANRIADVPAE SLPAQLRWLI LTDNAITQLP
ATLGWRPRLQ KLMLAGNRLR DLPDLSRCTQ LELLRLAANR FETLPAWLLD LPRLSWLALA
GNPLRAPFGA RPQQPLRPDR PDIARIAWSQ LQLEHALGEG ASGVIHRALW QPPDQHAPQD
GREPPARQHS PARPVAVKLF KAAMTSDGLP DCEMAACIAA AGHPGLIAVE GVLHAHPEGS
AGLVLALLDP AYRALAGPPS LASCSRDVYA DTLRLPVAAA LAIARRIADV AAHLHAQGLM
HGDLYAHNIL WNGETQQPQC VLSDFGAASF HDPASPAAEA LQRLEVRAFG CLLEELIERA
DAAHAAETDA LAAMAALRDA CLQPQVHARP SLAQVVGQLA QIGH
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