Gene Lcho_0084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0084 
Symbol 
ID6160350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp86507 
End bp87097 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content74% 
IMG OID641662828 
Productrestriction endonuclease 
Protein accessionYP_001789124 
Protein GI171056775 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.00892855 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCCAAGA ATTCGCTGTT TGCCGTGCTG CTGCGTTCGC GGTGGTGGGT CAGCGTGTGC 
ATCGCCGGGG TGATGGCGCT GCTGGCCTGG GTGGTGCTGC CCGAGGACTA CCGTGTGGCC 
GGCGTGCTGG GCTGTTTCCC GTTCCTGGTG ATCGGTGCGA TGGCGGCGTG GCGTCAGCGC 
GATCTGCCCA GCCCGGCCCG GGTCGGGCAG ACGCTGGAGG CCGTCGGCGC CATGCCCTGG 
CCGGCGTTTT CGGCCTTGCT GGAACAGGCC TTCCGCCGCG ACGGTCATGC GCTGCAGCGG 
CGCAGCGGGG CGGTCGACTT CGCGCTCGAA CGCCAGGGCC GGCACACGCT GGTGAGCGCG 
CGGCGCTGGA AGTCCGCCCG CACCGGCCTG GAGCCGCTGC GCGAACTGCA GGCCGCCCGC 
GTGGCCCGCG AGGGCGACGC CCTGCCCGAC GCGATCTACA TCGGCCTGGG CGAGCCCAGC 
GACAACGCCC GGGCCTACGC CGCCGAACAC GGCATCACCC TCTGGCAAGC CGCCGAACTG 
GCGCACGCAC TGCGCGGCCT GCCGCTGCCG GCGACGCCGC CGACGCGCTG A
 
Protein sequence
MAKNSLFAVL LRSRWWVSVC IAGVMALLAW VVLPEDYRVA GVLGCFPFLV IGAMAAWRQR 
DLPSPARVGQ TLEAVGAMPW PAFSALLEQA FRRDGHALQR RSGAVDFALE RQGRHTLVSA 
RRWKSARTGL EPLRELQAAR VAREGDALPD AIYIGLGEPS DNARAYAAEH GITLWQAAEL 
AHALRGLPLP ATPPTR