| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0082 |
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| Symbol | |
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| ID | 6159730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 84204 |
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| End bp | 85490 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641662826 |
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| Product | aminotransferase |
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| Protein accession | YP_001789122 |
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| Protein GI | 171056773 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0510162 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGTCG GCCGCTCCTG CGGCCACGTC GCTCGGACGG TTCCGGGCGC TCACGTGAAA
GTCATCGACA TGTCCTCTGC CTCCACCGGC AAGCGCCGCT TCGCGCGCAT CGACCGCCTG
CCCCCCTACG TCTTCAACAT CACGGCCGAG CTGAAACTCG CCGCGCGCCG CCGTGGCGAA
GACATCATCG ACCTCAGCAT GGGCAACCCC GATGGCGCGA CGCCCGCGCA CATCGTCGCC
AAGCTGACCG AGGTCGCGCA GCGCGCCGAC ACCCACGGCT ACTCGGCCAG CAAGGGCATC
CCGCGCCTGC GCCGCGCCAT CAGCCACTGG TACCAGGACC GCTACGCCGT CGACATCAAC
CCCGACACCG AGGCCATCGT CACCATCGGC TCGAAGGAAG GCCTGGCGCA CCTGATGCTC
GCCACGCTCG ACCGCGGCGA CACCGTGCTG GTGCCCGACC CGAGCTACCC GATCCACATC
TACGGTGCGG TGATCGCGGG GGCCGATATC CGCTCGGTGC CGCTGATCCC GGGCGTCGAC
TTCTTCGCCG AACTGGAGCG CGCCATCCGC GGCAGCTACC CCAAGCCGAA GATGATGGTG
CTGGGTTTCC CGAGCAACCC GACGGCGCAG TGCGTGGAGC TCGACTTCTT CGAACGCGTG
ATCGCGCTGG CCAAGAAACA CGACATCTTC GTCGTGCACG ACCTGGCCTA CGCCGACATC
GTGTTCGACG GCTGGAAGGC GCCGAGCATC ATGCAGGTGC CGGGCGCCAA GGACGTGGCG
GTCGAGTTCT TCACGCTCAG CAAGAGCTAC AACATGGCCG GCTGGCGGAT CGGCTTCATG
GTCGGCAACC CGGATCTCGT GGCCGCGCTG GCGCGCATCA AGAGCTACCA CGACTACGGC
ACCTTCACGC CGCTGCAGGT GGCCGCGATC GCCGCGCTGG AGGGCGATCA GCAGTGCGTC
AAGGACATCG CCGCCAACTA CCAGAAGCGC CGCGACGTGC TCTACAAGGG CCTGATCGAA
GCGGGCTGGC AGGTCGAGTG CCCGAAGGCG GCGATGTACA TCTGGGCCAA GATCCCGCCG
GCCTACGCGG CGTTGGGCTC GCTCGAATTC GCCAGGCAGC TGCTCGAGAA GGCCAAGGTC
TGCGTCTCGC CGGGCATCGG TTTCGGTGAC CATGGCGACG ACCACGTGCG CTTTGCGCTG
ATCGAGAACG AGGCCCGCAT CCGCCAGGCG GTGCGTGGCA TCAAGGCGAT GTTCAAGGCC
GACGGGGTGG TGGTGCCGGC CGGCTGA
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| Protein sequence | MRVGRSCGHV ARTVPGAHVK VIDMSSASTG KRRFARIDRL PPYVFNITAE LKLAARRRGE
DIIDLSMGNP DGATPAHIVA KLTEVAQRAD THGYSASKGI PRLRRAISHW YQDRYAVDIN
PDTEAIVTIG SKEGLAHLML ATLDRGDTVL VPDPSYPIHI YGAVIAGADI RSVPLIPGVD
FFAELERAIR GSYPKPKMMV LGFPSNPTAQ CVELDFFERV IALAKKHDIF VVHDLAYADI
VFDGWKAPSI MQVPGAKDVA VEFFTLSKSY NMAGWRIGFM VGNPDLVAAL ARIKSYHDYG
TFTPLQVAAI AALEGDQQCV KDIAANYQKR RDVLYKGLIE AGWQVECPKA AMYIWAKIPP
AYAALGSLEF ARQLLEKAKV CVSPGIGFGD HGDDHVRFAL IENEARIRQA VRGIKAMFKA
DGVVVPAG
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