| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0081 |
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| Symbol | |
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| ID | 6159729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 83480 |
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| End bp | 84202 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641662825 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_001789121 |
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| Protein GI | 171056772 |
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| COG category | [K] Transcription |
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| COG ID | [COG1802] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0384322 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATCT CTGACCGCCT GCGCGAAACC ATCGAGGAGC AGATCGCCAC CGGCGAGCTG
GCGCCCGGCA GCGCGCTCGA CGAGGCGCTG CTGGTTGAGC GCCACGGCGT CTCTCGCACC
CCCGTGCGCG AGGCGCTGAT CCAGCTGGCG GCCGAAGGGC TGGTGGAACT GCGGCCGCGC
CGCGGCGCGG TGGTGGCGGC GCTCGGGCCG ACCCGGCTGA TCGAGATGTT CGAGGTGATG
GCCGAGCTGG AGGCGATGTG CGCCCGCCAG GCCGCGCGGC GCGCCACCGA GGCCGATCTG
GCAGCGATCC AGGCGGCACA CGAGCGCTGC CGCAGCGCCG CCGGCGAGCT CGACCCGGAC
GCCTACTTCT ACGCCAACGA AGGTTTCCAC CGCGCCATCT ACGACAGCGC GCACAACGCC
TTCCTGGCCG AGCAGGCGCA GGCGCTGCAG CGCAAGCTGC GGCCCTACCG GCGCCTGCAG
CTGCGGGTGC GCAACCGGCT GCAGCGCTCG TTCGAGGAAC ACCAGGGCAT CGTCGACGCG
ATCCGCAACG GCGACGCCGA GCTTGCGGTC AACGCGGTGC GCAACCACGT CATCGTGCAG
GGCGAGCGCT TTGCCGACCT GCTGGCCGGC CTGCGCCAAC TCGAAAGCGC GGTGCCGCGG
CCGAGCGCTG CGCCGGCCGC CCATACCAGC GTCAACACCG ACCCGGCCGC GCGCATCGCC
TAA
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| Protein sequence | MKISDRLRET IEEQIATGEL APGSALDEAL LVERHGVSRT PVREALIQLA AEGLVELRPR
RGAVVAALGP TRLIEMFEVM AELEAMCARQ AARRATEADL AAIQAAHERC RSAAGELDPD
AYFYANEGFH RAIYDSAHNA FLAEQAQALQ RKLRPYRRLQ LRVRNRLQRS FEEHQGIVDA
IRNGDAELAV NAVRNHVIVQ GERFADLLAG LRQLESAVPR PSAAPAAHTS VNTDPAARIA
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