| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0080 |
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| Symbol | |
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| ID | 6159728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 82296 |
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| End bp | 83327 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641662824 |
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| Product | hypothetical protein |
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| Protein accession | YP_001789120 |
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| Protein GI | 171056771 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.141434 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACAGC CCCGCAGCCC TCGCGCACCG CGCACCGCTC CCACCCGTCG ACTGGCCTTG
CAGCAGGCGG GCCTCTGCCT CGCCGGCGTC CTGGTGGCGG GTCTGTCGGT CCCCGCGTCG
GCCCAGACCC AGGCCTGGCC GAGCAAGCCC GTCACGGTGG TGGTGCCGTT CCCGGCCGGC
GGCGGCACCG ATGCGTTCGC GCGCCCGCTC TACGCCCAGC TCACCAAGCA GCTCGGCATG
CAGGTGGTGA TCGACAACAA GGGCGGCGCC GGTGGCAACG TCGGCGCCAC GGTGGCGTCC
AAGGCCGCGC CCGACGGCTA CACCTGGTTC ATGGGCGCGG TGCACCACGC CATCGCGCCG
TCGATCTATC CCAAGCTCGA CTACAACCTG GGCAACGATT TCGTGCCGGT GGCGCTGATC
TCCAACGTGC CGCAGGTGAT CGTCGTCAAC CCGCAGAAGG TGCCGGCCAA CAACCTCAAG
GAGCTGCTGG CGCACCTGAA GGCCAACCCG GGCAAGCTCA GCTACGGCTC GGCCGGCAAC
GGCTCGTCGC ACCACCTGGC GGGCGAGCTG TTCAAGATGC AGACCCAGAC CTTCATCACC
CACATCCCGT ATCGCGGCGC CGGCCCGGCG CTGCAGGACC TGATCGGCGG CCAGGTCGAC
ATGATGTTCG ACGGCCTGGG CTCGTCGGCC ATCCACATCA AGAGCGGCCG GCTGCGCGCG
ATCGCGGTGG CGAGCGAAAA ACGTGCGCCC GGTTTCCCGG ACATCCCGAC CAGCATCGAA
GCGGGCGTGC CGACCTACCA GGTCGCCACC TGGTACGGCC TGTGGGCGCC CAAGGGCACG
CCCAAGGAGA TCGTCGAGCG CATGGCCGCC GAGCTGCGCA CGGCCTTCGC CAGCAAGGAG
ATCAAGGACG CCTGGACCAA CCTCGGCTCC GAGATCCCGA CGCTCGCCGG CCCGGCCTTC
GGCGACTTCG TGACGTCCGA AACCAGGCGC TGGGCCACGG TGGTGAAGGA CGGCAACATC
AAGATGGAAT GA
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| Protein sequence | MTQPRSPRAP RTAPTRRLAL QQAGLCLAGV LVAGLSVPAS AQTQAWPSKP VTVVVPFPAG
GGTDAFARPL YAQLTKQLGM QVVIDNKGGA GGNVGATVAS KAAPDGYTWF MGAVHHAIAP
SIYPKLDYNL GNDFVPVALI SNVPQVIVVN PQKVPANNLK ELLAHLKANP GKLSYGSAGN
GSSHHLAGEL FKMQTQTFIT HIPYRGAGPA LQDLIGGQVD MMFDGLGSSA IHIKSGRLRA
IAVASEKRAP GFPDIPTSIE AGVPTYQVAT WYGLWAPKGT PKEIVERMAA ELRTAFASKE
IKDAWTNLGS EIPTLAGPAF GDFVTSETRR WATVVKDGNI KME
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