| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0077 |
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| Symbol | |
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| ID | 6159725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 79341 |
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| End bp | 80243 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641662821 |
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| Product | malonate decarboxylase subunit beta |
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| Protein accession | YP_001789117 |
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| Protein GI | 171056768 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0777] Acetyl-CoA carboxylase beta subunit |
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| TIGRFAM ID | [TIGR03133] malonate decarboxylase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.405933 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTCA GCTACGCCGA ATGCAGCGCC CGCGAGCGCG TCAAGCTGTT GCTCGATGAC
GGCGCCTTCC ACGAGTGGCT GCCGCCGTCC GAGCGGCTCA CCAGCCCGCA CCTCGCGCAG
CTGGGTGTGC CCTCGTCGTT CGACGACGGC GTGGTGATCG GCCGCGGCCG GCTCGACGGG
CAGGTGGTCT TCGTCGCCTC GCAGGAAGGC GCGTTCATGG GCGGCGGCGT CGGCGAGGTG
CACGGCGCCA AGCTGGTCGG CTTGTTCAAA CGCGCGCTCC GTGACCGCCC GGCCGCCGTG
CTGCTGCTGG CCGAATCCGG CGGCGTGCGG CTGCACGAGG CCAATGCCGG GCTGATCGCG
GTGTCGGAGG TGATGCGCGC GCTGCTCGAC GTGCGCGCCG CCGGCATCCC GGTGATCGTG
CTGATCGGCG GCGCCAACGG CTGCTTCGGC GGCATGGGCA TCGTGGCGCG CTGCGCCGAC
CACCTGATCA TCAGCGACAT CGGCCGGCTG GCGATGTCGG GCCCCGAGGT GATCGAAGCC
TCGCACGGCG TCGACGAATT CGACTCGCGC GACCGCGCGC TGGTCTGGCG CACCACCGGC
GGCAAACACC GCTGGCTCTG CGGCGACTGC GACGACCTGG TCGACGACGA CGTGGCGGCT
TTCCGCGCCG CGGCCATCGC GGCACTCGAC CGGCGCCGGC CGATGGATGC CGCCGAGCTG
GAGCGCGAAC ACCGCCTGCT GGCGCAGCGC CTGGCCGATG CCCCGGCGGG CGCCGACGCG
CTGGCCTTGT GGCGCCAGCT GGGCGTGCCA CGCGCCGAGC AGGTGAGCGA CCTCGATGCC
GCCGAGCTGT GCGCCTTGCG CAGCGCCGCC ACCACGACGA CCACCACCCC GCAAGGAGCT
TGA
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| Protein sequence | MSLSYAECSA RERVKLLLDD GAFHEWLPPS ERLTSPHLAQ LGVPSSFDDG VVIGRGRLDG
QVVFVASQEG AFMGGGVGEV HGAKLVGLFK RALRDRPAAV LLLAESGGVR LHEANAGLIA
VSEVMRALLD VRAAGIPVIV LIGGANGCFG GMGIVARCAD HLIISDIGRL AMSGPEVIEA
SHGVDEFDSR DRALVWRTTG GKHRWLCGDC DDLVDDDVAA FRAAAIAALD RRRPMDAAEL
EREHRLLAQR LADAPAGADA LALWRQLGVP RAEQVSDLDA AELCALRSAA TTTTTTPQGA
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