Gene Lcho_0075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0075 
Symbol 
ID6160299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp77869 
End bp78630 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content74% 
IMG OID641662819 
Productholo-ACP synthase, malonate decarboxylase-specific 
Protein accessionYP_001789115 
Protein GI171056766 
COG category 
COG ID 
TIGRFAM ID[TIGR03135] holo-ACP synthase, malonate decarboxylase-specific 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTTCA TCCCCGCCGT GATCACCCAC GCCCGCAACG CCGACATGTC ACGGCCACCG 
CTCGCCTTGC GTCGCCACCA GCTGGTGCGG CTCTCGCCCG CGGGCTGGCA AACCGTGCTG
GCGCAGACGC ACGCCGAGTC GGCCCGGCCT TGCCTGGCGC ACTGGGCCGC GCACGATCTG
CCGCTGGTTG TCACCCGTCA GCCCGAATCC GCAGCCGACG CCGAGGCGAT CCACCTCGGC
CTGCCGGCGC CGACCTGCTG GCAGCGCCAG CGCCTGAGCC TCGCGGTGGC GCGCTCGGCG
GTGCGGGCCG TGGGCGAGTT TCCAGCCGCC ATCGACATCA CCGGGCAACT GCCTGATGCC
GCGCAGGCGC CGTGGCGCCG GCTGTGCGAT CAGCTCGGCG CGCTGGGTCT GCACGCGCAG
GTCTACGGCA GCCACGGCTG GCAGCAGCTG ACCGGGCTCG CCTACCTGCG CGCGCAATCC
GACCTCGACC TGTTCGTGCC GGTGCCCGAT GCGCACGCCG CCGATGCCGC CGCGGCCCTG
CTGGCAGATG CCACGGCGGC CCTTCTGGCC GAGGCCGGCA TCGACGCGCC ACGGCTCGAC
GGCGAACTCG GTTTTGTCGA TGGCAGCGCG GTGGCCTGGC GCGAGTGGCG GGACTGGCGC
GCCGGGCGGG TCGCGCAGAT CCTCGTCAAG CGCCTGCAGG GCGTGGCGCT GGCGTCGGGC
ACCGATTGGC TGCCGCGGAC CGGCGCGGAG CGGGTCCGAT GA
 
Protein sequence
MAFIPAVITH ARNADMSRPP LALRRHQLVR LSPAGWQTVL AQTHAESARP CLAHWAAHDL 
PLVVTRQPES AADAEAIHLG LPAPTCWQRQ RLSLAVARSA VRAVGEFPAA IDITGQLPDA
AQAPWRRLCD QLGALGLHAQ VYGSHGWQQL TGLAYLRAQS DLDLFVPVPD AHAADAAAAL
LADATAALLA EAGIDAPRLD GELGFVDGSA VAWREWRDWR AGRVAQILVK RLQGVALASG
TDWLPRTGAE RVR