Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0063 |
Symbol | |
ID | 6160287 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 66471 |
End bp | 67256 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641662807 |
Product | putative cytochrome c |
Protein accession | YP_001789103 |
Protein GI | 171056754 |
COG category | [C] Energy production and conversion |
COG ID | [COG3258] Cytochrome c |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCCGA TGCGCGTTAC CGCTGCGTTC GCGCTCTCGT TCGCCTGGCT CGCAGCGGCC ACTGCGATGG CGCAATCGGT GACCGACCCG CGCCGCTCCG GCTTCGACGA CATGGGCGCG CAGACCCAGG CGATGCAGCG TGACGACACG CTCAACCCCG GCCTGCTGTG GGTGCAGGAC GGTGAGGCGC TGTGGTCGCA GCCGGTGGGC GAGGCGGCCA AGTCCTGCGC CAGCTGCCAC GGCGAGCGGG CCACGTCGAT GCGCGGCGTG GCGGCGCGTT ACCCCGCTTT CGACACGCTG CTGGGCCGCC CGGTCGACCT GGCGCAGCGC ATCAACCTGT GCCGCCAGCG GCATCAGCAG GCGCCCACGC TGGCGGCCGA AAGCCAGCCC TTGCTGGCGC TCGAAAGTGC GCTCGCCCAC GCCTCGCGCG GCCTGCCGCT GGCCAGTGCC GACGACCCGC GGCTGGCGCC GTTTCGCGAC CGCGGCGAGG CGCTGTACCG GCAGCGCATC GGCCAGATCG ACCTGTCGTG CGCGCAGTGC CACGACCAGC GCGCCGGCCT GCGCCTGGGC GGCAGCCGGA TCCCGCAGGG CCACGTCAAC GGCTACCCGA CCTACCGGCT CGAATGGCAG GGCATCGGCT CGCTGCAGCG CCGGCTGCGC AACTGCCTGA CCGGCGTGCG CGCGCAGGTG CCGGACTGGG GCGCGCCGGC GCTGGTCGAG CTGGAGCTGT ACCTCGCCTG GCGCAGCCGC GGCCTGCCGG TCGAAGCGCC CGCCGTGCGG CCGTGA
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Protein sequence | MKPMRVTAAF ALSFAWLAAA TAMAQSVTDP RRSGFDDMGA QTQAMQRDDT LNPGLLWVQD GEALWSQPVG EAAKSCASCH GERATSMRGV AARYPAFDTL LGRPVDLAQR INLCRQRHQQ APTLAAESQP LLALESALAH ASRGLPLASA DDPRLAPFRD RGEALYRQRI GQIDLSCAQC HDQRAGLRLG GSRIPQGHVN GYPTYRLEWQ GIGSLQRRLR NCLTGVRAQV PDWGAPALVE LELYLAWRSR GLPVEAPAVR P
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