| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0060 |
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| Symbol | |
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| ID | 6160284 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 64025 |
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| End bp | 65026 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641662804 |
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| Product | luciferase family protein |
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| Protein accession | YP_001789100 |
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| Protein GI | 171056751 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR03558] luciferase family oxidoreductase, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTCGC TGTCCGTCCT CGACCTCGCC CCCATCGCCG AAGGCAGCGA TGCGGCCACT
GCGCTGACAT GCGCGCTCGA CCTGGCGCAG CACGCCGAAC GCTGGGGCTA CCGGCGCTAC
TGGCTGGCCG AACACCACAA CATGGACGGC CTGGCCTGCT CGGCCACCGC CGTGCTGGTG
GGCCACATCG CCGGCGGCAC GCACACCATC CGCGTCGGCT CGGGCGGCAT CATGCTGCCC
AACCACGCGC CGCTGGTGGT GGCCGAGCAG TTCGGCACGC TGGCCACGCT GTATCCGGGC
CGCATCGACC TCGGCCTGGG CCGCGCGCCC GGCACCGACC AGGCCACCGC CCGCGCGCTG
CGCCGCCACC TGCAGGCGGG CGACGAAGAA GGTTTCCCGC AGGACGTGAT GGAGCTGCAG
CGCTACCTCG CCAAGCCCGA GCCCGGCGAG CCGGGCCACG CGGTGCGCGC CATCCCCGGC
ACCGGCACGC AGGTGCCGAT CTGGCTGCTC GGCTCGAGCC TCTACAGCGC GCAGCTGGCC
GCCTGGCTGG GCCTGCCGTT CGCGTTTGCC TCGCACTTCG CGCCCGACAT GCTGATGCAG
GCGCTCGAGG TCTACCGCAG CAGCTACCGG CCCAGCGCCG AGTGGCCCAA GCCGCATGCG
ATGGTCGGCA TGAACGTGGT CGCCGCCGAT ACCGACGAAG AAGCCGCCCG CCTCTACACC
TCGATCCAGC AGCGTTTCCT CGGCATGGTG CGCGGCCGCC GCGGCCCCTT GCCGCCGCCG
GTGGCGAGCA TGGACGGCCT GTGGAACGAG GCCGAGCGGC GCCAGGTGGA GCGCATGCTG
GCGGTGTCGG TGGTCGGCTC GCCATCGAGC GTCACGCAAG GCCTGCGCGC GCTGCTGGCG
CGCACCGGCG CCGACGAGCT GATCGTGGCC GGTGCCATCC ACGATCACGC GGCGCGGCTG
CGTTCGTACG AGCTGGCGGC GCAATGCGCG GCGGCGTGCT GA
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| Protein sequence | MTSLSVLDLA PIAEGSDAAT ALTCALDLAQ HAERWGYRRY WLAEHHNMDG LACSATAVLV
GHIAGGTHTI RVGSGGIMLP NHAPLVVAEQ FGTLATLYPG RIDLGLGRAP GTDQATARAL
RRHLQAGDEE GFPQDVMELQ RYLAKPEPGE PGHAVRAIPG TGTQVPIWLL GSSLYSAQLA
AWLGLPFAFA SHFAPDMLMQ ALEVYRSSYR PSAEWPKPHA MVGMNVVAAD TDEEAARLYT
SIQQRFLGMV RGRRGPLPPP VASMDGLWNE AERRQVERML AVSVVGSPSS VTQGLRALLA
RTGADELIVA GAIHDHAARL RSYELAAQCA AAC
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