Gene Lcho_0053 details

Gene Information

• Locus tag: Lcho_0053
• ID: 6160000
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Leptothrix cholodnii SP-6
• Kingdom: Bacteria
• Replicon accession: NC_010524
• Strand: +
• Start bp: 57758
• End bp: 58564
• Gene Length: 807 bp
• Protein Length: 268 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 641662797
• Product: hypothetical protein
• Protein accession: YP_001789093
• Protein GI: 171056744

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 37
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTTGAACA AGAACTCACA GCAGATCATG CCGGTGCGCG TCAGGACGTC TTGGCGCAGG 
CCGATCCGCA CCGTCGCGAC CGCCTGCACA TGGCTGGCCC TGGCGGTTGC CGCGCAGGCC 
GGAATGGATG GGGGTGGTGG CAGCTCACGC AAGACGGATA CCGGTCACGA CGGGTCGCAA 
GCGGCGCGCT CGAGCGAATC GGCCCGGTCG GAACACTCGA GGGGCAACTG GCAGGGGCGA 
CCCATGGCGC AGTGGGTGCC GACGTTCTGG CGCTGGTTCT TTTCGGTGCC GGCCAGTGTG 
GGCGCCACGG ACACCACGGG CGTGCAATGC GGCCTCCATC AGGAAGGGCC GGTGTGGTTT 
CTTTCTGCGC CGCTGGGTGG TCAGGGGCCG TTCGAGCGGA CTTGCACGGT ACCGCGCGGC 
AAGGCGATCT TCACGCCGGT CGCTACCTTC CTGAACGACT ACCCCTGCCC CGACCCGACA 
TTCAAGCCGG CTGCCGGGCA GTCGCTGGAC GATTTTCTGG GCAGCGGTCT GGTCGACATC 
ATCGACAGCT TCACCCTGCT CGAAGCCAGC CTGAACCACC GCCCGATCAA AGTGCTGCGT 
CTGACGACAC GCACCTTCGG CTTCACTGGC GCGGTGGACT GGAAGGGCAT CGATCAGTGC 
ATCACGGGTT CACCGCAGAG CGGTTTGAGC GACGGCTACT TCGTCGCCAT CGAACCGTTG 
CCGCCCGGCA CCCACGAACT GCGGGTCAAA TCCTTCAGCA GTTTCTTCGG CCTCACCGAG 
GGCACGTTCA AGCTGGAAGT GCGTTGA 

 

Protein sequence

MLNKNSQQIM PVRVRTSWRR PIRTVATACT WLALAVAAQA GMDGGGGSSR KTDTGHDGSQ 
AARSSESARS EHSRGNWQGR PMAQWVPTFW RWFFSVPASV GATDTTGVQC GLHQEGPVWF 
LSAPLGGQGP FERTCTVPRG KAIFTPVATF LNDYPCPDPT FKPAAGQSLD DFLGSGLVDI 
IDSFTLLEAS LNHRPIKVLR LTTRTFGFTG AVDWKGIDQC ITGSPQSGLS DGYFVAIEPL 
PPGTHELRVK SFSSFFGLTE GTFKLEVR