| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0049 |
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| Symbol | |
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| ID | 6159821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 53567 |
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| End bp | 54580 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641662793 |
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| Product | putative nitrate transport protein NrtA |
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| Protein accession | YP_001789089 |
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| Protein GI | 171056740 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGATG CGATCCGCCA CTCTGCGAGC CGCCGCGAGC TGCTGCAAGG GGCCGCCGCG
CTGGCGGCGT TCGGCAGCCT GGCCGGTGCC TGCAACCCGG CGGCCGCGCA GGAGCGGCCC
GAGACCGGCA CGGTGCGTTT CAACCACTCG CCGTCGATCT GCCTGGCGCC GCAGTACCTG
GCCGGCGAGC TGCTGCGCAA CGAGGGTTTC GACGACGTGC GCTACCTGCC GGTCGGCACG
CGCGCCGCAC CCGACGCGCT GGCCGATGGC CGGCTCGATG TCGGCATGTG GTACACGACC
GGCTACCTGC CGGTGCTCGA TGCCGACCGG CCGGTGGTGC TGCTGGCCGG GCTGCACCTG
GGATGCTGGG AGCTGTTCGG CAATCACAAG GTGCAGAGCC TGCGCGACCT GCGCGGCAAG
ACCGTGGTGT GCGAGAAGAT GCAGGGCGGC GACCAGATCC TGCTGTCGAG CATGCTGGCC
TACGTGGGCA TCAAGCCGGC CGAGGTGAAC TGGCTGGCCC GCCCGCCGGG CAGCGCGATG
AGCGCCTTCA TCGCCGGCAT GGCCGATGCC TTCCTGGCCT TCCCGCCCGA GCCGCAGGAG
TTGAAACAAC GCCAGATCGG CCACGTGCTG CTCGACACCA ACGTCGACAA GCCCTGGTCG
CAGTACTACT GCTGCATGAT CGGCGCCAAT CGCGATTTCG TGGCGCGCCA CCCGATCGCC
ACCAAGCGCG TGCTGCGCGC CATCCTGAAG GCCACCGAGC TGTGCACCGC GCAGCCGGTG
CAGGTGGCCG GCTACATGCG CGACCACGGC TACGAGCCGC GTTACGACAT CGGCCTGGCG
GCGCTGCAGC GCATCAACTA CGACTACCGC GCCGCCGACC CGGCCGACAC GCTGCGCTTT
CATGCGCTGC GGCTGCGCGA CATCGGCGTC ATCAGATCGA CGCCACAGCG GCTGATCGAA
CGCGGCACCG ACTGGCGCTT TCTCAACGAG CTCAAGCGCG AGCTGAAAGC CTAG
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| Protein sequence | MNDAIRHSAS RRELLQGAAA LAAFGSLAGA CNPAAAQERP ETGTVRFNHS PSICLAPQYL
AGELLRNEGF DDVRYLPVGT RAAPDALADG RLDVGMWYTT GYLPVLDADR PVVLLAGLHL
GCWELFGNHK VQSLRDLRGK TVVCEKMQGG DQILLSSMLA YVGIKPAEVN WLARPPGSAM
SAFIAGMADA FLAFPPEPQE LKQRQIGHVL LDTNVDKPWS QYYCCMIGAN RDFVARHPIA
TKRVLRAILK ATELCTAQPV QVAGYMRDHG YEPRYDIGLA ALQRINYDYR AADPADTLRF
HALRLRDIGV IRSTPQRLIE RGTDWRFLNE LKRELKA
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