| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0031 |
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| Symbol | |
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| ID | 6159827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 35295 |
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| End bp | 36716 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641662776 |
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| Product | hypothetical protein |
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| Protein accession | YP_001789072 |
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| Protein GI | 171056723 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.61903 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAGCT GCCCGACACC CTCGATCCCG TCGTCCAACC CCTCCTCCTT CAACGCCCGC
GGCGGCACCC GCCCGGCCGC GGGCCGCCGG CTCGGCACCG GCTTGGCCGC CATCGCGCTG
GCCGTGGCGC TGCTGAGTGC CTGCGGCGGC GGTGACGACA CCACCGACGG CGCCACCAGC
AGCGCGCTGG CCGTGACCGA CACCAGCCAG GGCATGAGCG TGACCCTGCA CACCCGGACC
GACGGCGACA GCGCGGCCGG CAGCGGCACC GCCAGTGCCG CGCCGGCCCG CGCGCCGTCG
AAATCATCGT CCGACGACAC GAAGGACGAT GCCGAGCAGG ACGACGACGA CAACGACGAC
GCGGCCACCG AGCGGAAGTG GACCGCCACC CAATACGCCC TCGACGCCAG CGTCACGAGC
GGGCCGCACG CCGGCCAGGC GCTCGGCGGT GCACTGCTGC TCAAGGGCGA GCTCAAGAGC
GACGGCACGA CCCGCCTCAA GGGCCGGTTC GTGCCGACCG CCAGCGACAG CGGCGTCGCA
CCGATCGTGA CCACGCTGCG CAACAGCAGC GCGCTGCAGG CGCTGCGGCA GCAATACCGC
AGCCGCATCG AGGCCCTGGT GGCCGAGCTG CGCAGCCAGA TCGGCCACGA TGCCGGCGGC
TTGGCCACGC CCGGTGGCCA ACAGGCCTTG AGCGCCTTCC GCAGCGGCCA CGACGAGGCC
ACCGAGCAGC TCCAGTCCGC CACCGACGAC CTGCTGATCG CCAGCCAGCA CGGCGGCCGC
GAAGCCCGCG AACACCGTGG CGGCGCCGTG CGCGTGCGCG GCACCCTGGC CGCAGACGGC
AGCGTCACGC TGACCCTGAC CTGGCGCGGC CACGCCGTCA CGCTGCAAGG CACCCAGGCC
GCCGACGGCA GCCTGTCGGG CAACTTCACC GACAGCGCCA CCGGCGACGC CGGCACCTGG
AATGCCGCAC TCGAAAACGG CGCGACGCCG AGCCCGGCTC CGGCGCCCAT CCCCCCCGCG
CCGGAACCGG CGCCGAGCCC TGCGCCTGCA CCTGCACCTG CCCCGGCACC GACTCCTGCG
CCCGCTCCGG CTCCGACGCC TGCCCCTGCC CCTGCCCCTG CCCCTGCCCC GGCTCCCGCT
CCCGCTCCCG CTCCCGCACC GGCACCTGCA CCTGCACCTG CACCCGCTCC GGCTCCCGCA
CCGGCCACCG GCGACATCGC CGCCGGCCAG CTCAAGTACA GCGTCACCTG CGCGGGTTGC
CACACCGCCA CCGTGTCGAA CAACGCGATG AACGTGACCA AGGCGGCCAC GCTGTCGGGC
ATCCAGAGCG CCATGAACAA GGGCGCCCAC GGCGGCTTTG CCAGCAGCCT GCTGGCGCAG
GATCTGCTGA ACCTGTCGGC CTACATCAAC AGCGCCAAAT AG
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| Protein sequence | MRSCPTPSIP SSNPSSFNAR GGTRPAAGRR LGTGLAAIAL AVALLSACGG GDDTTDGATS
SALAVTDTSQ GMSVTLHTRT DGDSAAGSGT ASAAPARAPS KSSSDDTKDD AEQDDDDNDD
AATERKWTAT QYALDASVTS GPHAGQALGG ALLLKGELKS DGTTRLKGRF VPTASDSGVA
PIVTTLRNSS ALQALRQQYR SRIEALVAEL RSQIGHDAGG LATPGGQQAL SAFRSGHDEA
TEQLQSATDD LLIASQHGGR EAREHRGGAV RVRGTLAADG SVTLTLTWRG HAVTLQGTQA
ADGSLSGNFT DSATGDAGTW NAALENGATP SPAPAPIPPA PEPAPSPAPA PAPAPAPTPA
PAPAPTPAPA PAPAPAPAPA PAPAPAPAPA PAPAPAPAPA PATGDIAAGQ LKYSVTCAGC
HTATVSNNAM NVTKAATLSG IQSAMNKGAH GGFASSLLAQ DLLNLSAYIN SAK
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