| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0028 |
|---|
| Symbol | |
|---|
| ID | 6159818 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | + |
|---|
| Start bp | 33103 |
|---|
| End bp | 33546 |
|---|
| Gene Length | 444 bp |
|---|
| Protein Length | 147 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641662773 |
|---|
| Product | GCN5-related N-acetyltransferase |
|---|
| Protein accession | YP_001789069 |
|---|
| Protein GI | 171056720 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0456] Acetyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.578829 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCACGA TCGACTCGTT CACCGACGCG GACCAGCCGG CCTGGCAGGA ACTGGCGCGG
GCCTACAAGG CGTTCTATCT CACCGGGCAG ACCGACTCGG AGTACCAGGC CACCTGGCAG
CGCCTGCGTG CGGGCGAGCA GGTGCACGGC TGGGCGGCAC GGCTCGACGG CCGGCTGGTG
GGCATCGTGC ACTGCCTGTT CCACGCCAGT GCCTGGACCG ACGACGTCTG CTACCTGCAG
GATCTGTTCG TGGCCGAGGC GGCTCGTGGT CAGGGCGTCG CCGCCGCCTT GATCGAACGG
GTGGCGCAGG CGGCCCGCGA GCGGGGGGCG CCGCGGCTGT ACTGGCTCAC GCAGGACCAC
AATGCCCGTG CGAGGGCCTT GTACGACCGC GTCGCGCAGA ACCGCGGTTT CATCCGCTAC
GACTACGTTC TGGGCCCGAC CTGA
|
|---|
| Protein sequence | MITIDSFTDA DQPAWQELAR AYKAFYLTGQ TDSEYQATWQ RLRAGEQVHG WAARLDGRLV
GIVHCLFHAS AWTDDVCYLQ DLFVAEAARG QGVAAALIER VAQAARERGA PRLYWLTQDH
NARARALYDR VAQNRGFIRY DYVLGPT
|
|---|
| |