| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0024 |
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| Symbol | |
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| ID | 6159814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 29798 |
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| End bp | 30430 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641662769 |
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| Product | DNA polymerase III, epsilon subunit |
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| Protein accession | YP_001789065 |
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| Protein GI | 171056716 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.13734 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAACCA TCGCCGTCAT CGACTTCGAA ACCACCGGCA TGACGCCGTC ACAGGGCGCG
CGCGCCACCG AGATCGGCGC GGTGCTGGTG CGCGGTGGCG AGATCGTCGG GCAGTACCAG
AGCCTGATGT ACAGCGGCGT CCACATCCCG CCGTTCATCG AGCAGCTCAC CGGCATCAGC
AACGCGATGT TGCGCGACGC GCCGCCGGCC GAGCAGGTGA TGCGCGAGGT GGCGGCCTTC
ACGCGCGGCT GCCCGATGGT GGCGCACAAC GCCGCCTTCG ACCGTGGCTT CTGGCTGGCC
GAGCGCGAGC GCGCCGGCTG CGAGCCCGAC CTGGCGCAGG AATTCGCCTG CACCGTGCTG
CTGTCACGCC GCCTCAACAC CGAGGCGCCC AACCACAAGC TCGGCACGCT GGCGAGCTGG
TTCGGCCTGC CGAACAACGG CCGCGCCCAC CGCGCGCTGG CCGATGCATT GACCACCGCG
CATCTGCTGG TGCGCCTGCA GGATCTGGTG GCGCAGCGTT ATGCCGATCA GTTGCAGGGC
CGGCCGGTGC GGCACGAGCT GCTCGCGGCG CTGCAGCGCG CACCCAAGAC GCAGCTCGAT
CGCTGCGTGG CGCGGGCTCA GGCCTCGTCC TGA
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| Protein sequence | METIAVIDFE TTGMTPSQGA RATEIGAVLV RGGEIVGQYQ SLMYSGVHIP PFIEQLTGIS
NAMLRDAPPA EQVMREVAAF TRGCPMVAHN AAFDRGFWLA ERERAGCEPD LAQEFACTVL
LSRRLNTEAP NHKLGTLASW FGLPNNGRAH RALADALTTA HLLVRLQDLV AQRYADQLQG
RPVRHELLAA LQRAPKTQLD RCVARAQASS
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