Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0020 |
Symbol | |
ID | 6159938 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 24852 |
End bp | 25925 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641662765 |
Product | hypothetical protein |
Protein accession | YP_001789061 |
Protein GI | 171056712 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.0363527 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGATCG CCCAGTTCGG CTCGGCGCTG TTCCTGGAGT CCGGCGCGGC GGTGCTGGCG CTGCGCCAGG ACCAGAGCCT GTCGGCCTAC TACGCCGGCC TGGGCGTGCA CGCCGTCGTC AGCACGCTGT TCATGCTGCT GCTCTACCTG CTGCTGCCGA CGCGGCTGCG CCACCCGCGC GCCACCGTGC TGCTGCTGTG TTTTGCGCTG ACCTTCTTCA TCCCGTTCTT CGGCCTGCTG GCGCTGTGGA TCGCGGTGCT GGTGACGCGC TGGCTGCCGC AGCGCATCGT GCGCCTGCCG TTCCGGCTGG CCGACGCGCC CGACCTGCCG CAGTCGGCGC GCGCCGAAGG GCGGCGCTTC CGCGAGCTCA GCGTGCGGCC GGTGCTGGCC GACGCGCGGC TGGCGCCGGC GCTGCGCACG CCGGCGCTCA ACGTGCTGTC GACCATGCCG CTGCGGGTGG TCGGCGACCT GCTGCACCAG CTGCTGGCCG ACCCGGTCGA GGAGATGCGG CTGGTCGCCT ACGGCCTGCT CGACAACCGC GAGAAGGAAC TGCGCCACCG CATCACCGAG CAGACCGCCG CGCTGCAGCG CATCGATGCC CACATCCAGG CGCTGGCCGA GGCGACACCG AAGGCGCGCG CGCGCATCAA GAGCGACGCG CACACCTCGC CTGCGCTGCA CGCGCTGCAC CTGCGCGCGA TGGTCGAGCT CAACTTCGAG CTGGTCTACC AGCGTCTGGT GCAGGGCGAT CTGCGCGACT TCGCGCTGCA GCAGGCGCTG ATCTACGCCG ACAAGGCGAT CGCGCTGGCC GGCCCCGAGG CCGGGCTGCT GCAGCTGCGG GCGCGGGTCT ACATCGAGGC CGACTACCTG GCGCGCGCCC GGGTCGACCT GGAGCAGGCG CAGGCCCACG GCGCGCCGCC GGTGCGGGTG CTGCCCTACC TGGCCGAGAT CGCCTACCGC AAGGGCGACT GGGCGGCCGT GCGCGAGCTG CTCGAACCCC TGCAATGCCT GCCGGTGTCG CCGCGCCTGG CCGCGCTGCG GCGCTACTGG TGCGGCCCCG GAGAAACGAC ATGA
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Protein sequence | MTIAQFGSAL FLESGAAVLA LRQDQSLSAY YAGLGVHAVV STLFMLLLYL LLPTRLRHPR ATVLLLCFAL TFFIPFFGLL ALWIAVLVTR WLPQRIVRLP FRLADAPDLP QSARAEGRRF RELSVRPVLA DARLAPALRT PALNVLSTMP LRVVGDLLHQ LLADPVEEMR LVAYGLLDNR EKELRHRITE QTAALQRIDA HIQALAEATP KARARIKSDA HTSPALHALH LRAMVELNFE LVYQRLVQGD LRDFALQQAL IYADKAIALA GPEAGLLQLR ARVYIEADYL ARARVDLEQA QAHGAPPVRV LPYLAEIAYR KGDWAAVREL LEPLQCLPVS PRLAALRRYW CGPGETT
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