| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0013 |
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| Symbol | |
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| ID | 6160073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 13710 |
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| End bp | 14801 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641662758 |
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| Product | hypothetical protein |
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| Protein accession | YP_001789054 |
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| Protein GI | 171056705 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0628] Predicted permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.00247664 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAACCCT CCGAAAGATC CTCGATGCCC GAAAGAACCA CGCCGCGCTG GCTGCACCGC
ACCGTGGTGG CCGGCCTGCT CGGGGCGTTG CTGCTGGTCG GCTTCGTGGT GATGCGGCCG
TTCCTGGTCT CGATCGCCTG GGCGGCGATC CTGGTCTACG TCTCGTGGCC GCTGCATGTG
CGCACGCTGG CGCTGCTGCG TGGCCACCGC GCCTGGGCTG CGCTGGCGAT GAGCGGCGTG
CTGACGCTGA CGCTGGGCGT GACGCTGCTG TGGCTGGGCC TGCTGCTGCG CGGCGAGCTG
ATCCTGGCCT TCCGCGAGGT CACCGCCCTG CTGCAGACCG GCCCGCACCT GCCCGAGCCG
ATCGCCCGCA TCCCGCTGCT CGGCCCGTGG CTGCAGGAGC GCCTGGCCGA GTTCGGCGGC
GACCGTGCCG CGCTCAAGCT GCAGCTGACC GAGCTGGCCG AACAGTGGGC CGGCCGCACG
CTGCGCATCC TCGGCGACGT CGGCGTCAAC GCGCTGCTGT TCGGCGTCGC GCTGGTGACG
TCGTTCTTCC TGTTCCGCGA TGGCGACCGC CTGCTCGAGC AGCTGCGCCG CATCCTGCAG
GGCCTGCTCG GCGAGCGGGT CGACGGCTAT TTCAATGCCG TCGGCGACAC CACCCGCGCG
GTCGTCTACG GCCTGCTGCT GGCGGCCACG GCGCAAGGCC TGATGGCCGG GCTGGGCTAT
TGGGTGGCGG GCGTGAAGGC GCCGGTGTTC TGGGGCGCGG CCACCGCGGT GATCGCGCTG
ATCCCGTTCG GCGCGCCGCT GGTGTGGGGC TCGATCGGGC TGTGGCTGCT GCTGCAGGGC
CAGCTCGGCG CGGGCATCGG CCTGCTGCTG TGGGGCGGGC TGGCGGTGAG CTGGATCGAC
AACCTGGTGC GGCCGATGGT CATCAGCGGC GTCGCCGACA TCCCCTTCCT GCTGGTGCTG
TTCGGCGTGA TGGGCGGGCT GGCGGCGTTC GGCCTGATCG GGCTGTTCGT CGGCCCGGTG
GTGCTGGCCG TGCTGCTGGC GCTGTGGCGC GAGTGGGCCG CGGTGATCGA GCCCGCCGCG
GCGGGCCGCT AG
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| Protein sequence | MKPSERSSMP ERTTPRWLHR TVVAGLLGAL LLVGFVVMRP FLVSIAWAAI LVYVSWPLHV
RTLALLRGHR AWAALAMSGV LTLTLGVTLL WLGLLLRGEL ILAFREVTAL LQTGPHLPEP
IARIPLLGPW LQERLAEFGG DRAALKLQLT ELAEQWAGRT LRILGDVGVN ALLFGVALVT
SFFLFRDGDR LLEQLRRILQ GLLGERVDGY FNAVGDTTRA VVYGLLLAAT AQGLMAGLGY
WVAGVKAPVF WGAATAVIAL IPFGAPLVWG SIGLWLLLQG QLGAGIGLLL WGGLAVSWID
NLVRPMVISG VADIPFLLVL FGVMGGLAAF GLIGLFVGPV VLAVLLALWR EWAAVIEPAA
AGR
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