Gene Lcho_0010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0010 
Symbol 
ID6160269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp11180 
End bp11866 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content78% 
IMG OID641662755 
Producthypothetical protein 
Protein accessionYP_001789051 
Protein GI171056702 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.000496254 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCGCGGG CGGCGCTGTC ATCGGCCGTG CTGCTGCTGG CCGCCTGCGC CGGCGGGCCG 
CCGCCGCCGG CCTGGCAGGG CAACGCCCGC CAGGCGCTCG ACCGCGCGGT CGAGGCCCAC 
CTGTCGGGCG ACAGCCGGGC CGAGGCGCAG GACTTCGCGC GGGCGCGCAG CGAGATCGCC 
CGCACCGGCA ACCCGGCGCT GATGGCTCGC GCCGAGCTGA TCCGCTGCGC CGCCCAGGTC 
GCCGGGCTGA TGTTCGGGCC CTGCGAGGGC TTCGAGCGCC TGCGTGCCGA TGCCGACCCG 
GCCGGGCGCG CCTACGCCGA CCACCTGGCC GCGATGCCGC TGTCGGCCGA CGACATCGCG 
CACCTGCCGT CGGCCCAGCG CGATGCCGCC GCGGCGGTGG CGTCGGCGCG GCGTGGTGGG 
CGCAGCGCAC CCGGCCCGTC CGCCGCCAGC CTGCAGAAGA TCGACGATCC GCTGGCGCGG 
CTGATCGCGG TGGCGGTGCT GTTCCAGGCC GGCCAGGCGA GCCCGGCGGT GATCGCGGTG 
GCGGCCGATA CCGCGTCGGC ACAAGGCTGG CGGCGGCCCT TGCTGGCCTG GCTGAACGTG 
CAGGCGCAGC GGGCCGAAAA CGCCGGCGAC AGCGCCGAGG CACAGCGCCT GCGGCGGCGC 
ATCGAGCTGG TCCGGAACGA CCGCTGA
 
Protein sequence
MARAALSSAV LLLAACAGGP PPPAWQGNAR QALDRAVEAH LSGDSRAEAQ DFARARSEIA 
RTGNPALMAR AELIRCAAQV AGLMFGPCEG FERLRADADP AGRAYADHLA AMPLSADDIA 
HLPSAQRDAA AAVASARRGG RSAPGPSAAS LQKIDDPLAR LIAVAVLFQA GQASPAVIAV 
AADTASAQGW RRPLLAWLNV QAQRAENAGD SAEAQRLRRR IELVRNDR