| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5978 |
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| Symbol | |
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| ID | 6128782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | - |
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| Start bp | 3172385 |
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| End bp | 3174355 |
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| Gene Length | 1971 bp |
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| Protein Length | 656 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641653062 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_001779589 |
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| Protein GI | 170738329 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.410257 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACTC TGACCCGTGA GGTGTTCCGG CAGGGGGCAT GGGTCGTACT GGCCGTCGGG
CTCGCGACCG CGCTGCAAGC GTGGGCGATT CGGGCTGTCG GCGAGCACGC GCCCTTTGCA
CCGCTGCCTT TTTACGCAGG TGTGGCGGCC GCCGCATGGC TGACGTCGTT CGGCGGCGGC
CTCGCCGCGG CCGCCGCGAG TGTCGGCGTG ATCGGCGCAT TGTGGTGGCG CGACGCGTCG
CTGCCGGCGC TGCTGGCGCA AGCCGGCGCG TTCGTCGCGA TCAGCTTCGT CGAATGCGTG
CTGGTGGCGG TCGTGAAGCC GCTGCTCGCG AACGATCGGT TGCGGGAGAT CGGCGACGAA
GAGAGCGAGC CGTCGTCCGT CGTGAGCGTG CCCGACGACG GGCTGCTGCG CCGGGTGGTC
GATGCGTCGC CCGACGCAAT CGTCGGGACC GATGCCGCGC GCCGGATCAC CAGCTGGAAT
CCGGCCGCGG CCAGCATCTT CGGCCTCGAT ACGGCCCAGG CGAACGGCCG CGACATCGTC
ACGATGATCG CGCCGCGCTG GTTGCGCCGG CACGCGGTGC CCGCGTCGTT CGCGGACCTG
CGCGCGCCGG TCGGGCCGCT CGACGTACTC TGCGTGCGCC CCAACGGCGG CCGTTTTCGC
GCCACCTTCG CCGCGTCGCC GATCGTCGAC GCGCAGGGCC ATTGCGCGGG CCTGTCATTG
ACGTTGCGCG AAGCGGGCGA ACGCCGCCGC AGCGAACGCC ACCACCTTCG CTCGCTGCGC
GGCGCCCGGG ACGCGCGCGT GCAGGCCGAC GCGTCGAACC GGCTGAAGGA CGAGCTGCTG
GCGACGGTGT CGCACGAACT GCGCACGCCG CTGAACGTGA TCTACGGCTG GGCCGAGGTA
TTGCGCAACG CCGACGGGCA GGATTTCGCG CAGCAGGCGG TCGACGCGAT CGATCGCAGC
GCGCGCTCGC TGTCGCATAT GGTCGCCGAC CTGCTCGACG CATCGTCCCT CGCGACCGGC
CGACTGCGCC TCGAACGCGT GCCGGTCGAC CTCGTGCGGA TCGCGCGCGA CGCCGCGCGT
GAACTCGACA CGACCGCCCA GGCGAACGGG CTCGTGCTGT CGACGGAATA CGCGATGCCG
GCCTGCGTGA TTCCGGCGGA TGGCGAACGC CTGCGCCAGC TCCTGTCGAA CCTGCTGTCG
AATGCGATCA AGTTCACGCC GCCGGGCGGC CGCGTCAACG TATCGCTGAC GCGCGCCGGC
GAGCGCGTGC GGCTGTCGGT GTCCGACACC GGGCAAGGCA TTGCGCCGGA ATACCTGCCG
CACCTGTTCG AGACGTTCAG CCGGCCGGAA GGCGCGTTCA CGTCGCCGAA GCGCGGTTTG
GGGCTCGGCC TGTCGATCGT GCGCAACATC GCGCAGCTGC ACGGCGGCGA GGTGGTCGCG
ACGAGCGCGG GCGCCGGGCG CGGCATGACC GTCACGGTGA CGCTGCCGGC CGGCTGGGAC
GCCGACGATC CGATGGAGCA GCCGTCGCGG GCGAAGGGCG CGTCCGACAC GGTCGCGCTC
GACGGCCAGC GCGTGCTGGT GGTCGACGAC GACGCAACGT CCCGGACCAG CCTCGCGGCG
GCGCTCGAAA CGATGGGCGC ACAGGTATCG ACCGCGCGGT CGGGGCACGA TGCGCTCGAA
GCGGTGGAGC GGCAGCCGCC GAGCGTCGTG CTGTCGGATC TCGCGATGCC GGACGGCGAC
GGTTACTGGC TGCTGGACCG GATCCGGCGC TTGCCGAACG GCGGCGGACA TCTGCCGGTC
GTCGCGGTGA CCGCGCACGC CGGCAAGGCC GACCGGCGCC GGGTGATGGC CGCAGGATTC
GATGCCTATC TTTGCAAGCC GGTCGACATG CCGACGCTCG CGAGCGTGAT CGTCGACGTC
GTACCGGATG ACGCGGGCGA CACGGGCGAC GGGAAGCCGC GTCGGCGGTA G
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| Protein sequence | MTTLTREVFR QGAWVVLAVG LATALQAWAI RAVGEHAPFA PLPFYAGVAA AAWLTSFGGG
LAAAAASVGV IGALWWRDAS LPALLAQAGA FVAISFVECV LVAVVKPLLA NDRLREIGDE
ESEPSSVVSV PDDGLLRRVV DASPDAIVGT DAARRITSWN PAAASIFGLD TAQANGRDIV
TMIAPRWLRR HAVPASFADL RAPVGPLDVL CVRPNGGRFR ATFAASPIVD AQGHCAGLSL
TLREAGERRR SERHHLRSLR GARDARVQAD ASNRLKDELL ATVSHELRTP LNVIYGWAEV
LRNADGQDFA QQAVDAIDRS ARSLSHMVAD LLDASSLATG RLRLERVPVD LVRIARDAAR
ELDTTAQANG LVLSTEYAMP ACVIPADGER LRQLLSNLLS NAIKFTPPGG RVNVSLTRAG
ERVRLSVSDT GQGIAPEYLP HLFETFSRPE GAFTSPKRGL GLGLSIVRNI AQLHGGEVVA
TSAGAGRGMT VTVTLPAGWD ADDPMEQPSR AKGASDTVAL DGQRVLVVDD DATSRTSLAA
ALETMGAQVS TARSGHDALE AVERQPPSVV LSDLAMPDGD GYWLLDRIRR LPNGGGHLPV
VAVTAHAGKA DRRRVMAAGF DAYLCKPVDM PTLASVIVDV VPDDAGDTGD GKPRRR
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