Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_5832 |
Symbol | |
ID | 6128636 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | - |
Start bp | 3010759 |
End bp | 3012147 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641652916 |
Product | major facilitator transporter |
Protein accession | YP_001779443 |
Protein GI | 170738183 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.160208 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCGGG AACCCACACA TTCCGTGCTG CTCTGGATCG TCGCCGCTGC GTTCTTCATG CAGTCGCTCG ATACGACGAT CGTCAACACC GCGCTGCCCT CCATCGCCCA AAGCCTGCAT GCGTCGCCGC TTGCGATGCA GCCCGTCGTG GTCGTCTACA CGCTGACGAT GGCGATGCTC ACGCCGGCCT CCGGCTGGCT CGCCGACCGG TTCGGCACGC GCCGCGTGTT CTCGGTCGCG ATCCTCGTGT TCGTGCTCGC GTCGATCGGC TGCGCGGCGT CGCATACGCT CGGCCAGCTC GTCGTCGCGC GCGCCGTGCA GGGCATCGGC GGCTCGATGC TGCTGCCGAT CGGGCGGCTC GCCGTGCTGC GCCGCGTGCC GGGCGAACAG TACGTCGCGG CGATCGCGTT CGTGTCGATC GCCGGCCAGC TCGGCCCGAT CGTCGGGCCG ACGCTCGGCG GCTGGCTCAC CCAGGCGATT TCGTGGCACT GGGTGTTCAT CGTCAACGTG CCGGTCGGCG TGGTCGGCTT CATCGCCGTG CAGCGCTACC TGCCGCACGA CCAGGCGACG CAACCGCCGC CATTCGACTT CGTCGGCTGT GCGTTGCTGT CGGCCGCGAT GATCGCGCTG TCGCTCGCGA TCGACCCGCC GATGTCCACG CACCGCGCCG CGTGGTCGGC CGCGCTCGCC GGGCTCGGCC TCGCGAGCGC GCTCGCGTAC CTGCCCCATG CGCGGCGACG CACGCAGCCG CTGTTCCGGC TCGGGTTGTT CCGCGAGCCG AACTTCGGCT CGGGGCTGCT CGGCAACCTG CTGTGCCGGA TCGGCACGAG TTCGGTGCCG TTCATGCTGC CGCTGCTGAT GCAGGTGCAG CTCGGCTATA CGCCGCTGCG ATCGGGGTTG ATGATGCTGC CGGCCGCGAT CGCGGGCGTC ATCGCGAAAC GGTGGATCGC GCCGCTCGTG AAGCGCTTCG GCTATGCGGC GTTTCTGGTC GTGAATACGG GAATCGTCGG CTGCGCGATC GCGGGGTTCG CGCTGGTGTC GGCGCGGCCC GCGCCGGTGC TGGAAGGTGT GCTGCTGATC GTGTTCGGCG CGGCGAATTC GATGCAGTTC GCGGCGATGA ACGGCGTGAC GCTCAAGGGG CTGTCGCATG CCGACGCCGG CAGCGGCAAC AGCCTGTTCA CGATGATGCA GATGCTGGCG ATGGGGCTGG GCGTCTCGAT CGGCGGCGGG CTCGTCAACC TGTTCGCCGC CTATCGGGGC TCGATGGCGC ACGGGTTCAT GCTGTCGTTC GCGTGCATGG GCGTGGTGAC GCTGCTGTCG TCCGTCGTGT TCCGGCGGAT CGATACGGCC GCGCCGCCGG TCAAGGCGAC GGCGCGACCT TCCGCGTGA
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Protein sequence | MSREPTHSVL LWIVAAAFFM QSLDTTIVNT ALPSIAQSLH ASPLAMQPVV VVYTLTMAML TPASGWLADR FGTRRVFSVA ILVFVLASIG CAASHTLGQL VVARAVQGIG GSMLLPIGRL AVLRRVPGEQ YVAAIAFVSI AGQLGPIVGP TLGGWLTQAI SWHWVFIVNV PVGVVGFIAV QRYLPHDQAT QPPPFDFVGC ALLSAAMIAL SLAIDPPMST HRAAWSAALA GLGLASALAY LPHARRRTQP LFRLGLFREP NFGSGLLGNL LCRIGTSSVP FMLPLLMQVQ LGYTPLRSGL MMLPAAIAGV IAKRWIAPLV KRFGYAAFLV VNTGIVGCAI AGFALVSARP APVLEGVLLI VFGAANSMQF AAMNGVTLKG LSHADAGSGN SLFTMMQMLA MGLGVSIGGG LVNLFAAYRG SMAHGFMLSF ACMGVVTLLS SVVFRRIDTA APPVKATARP SA
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